RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 TMEM175Q9BSA9 504 aa17.41■□□□□ 0.38
CLIC4-203ENST00000489758 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.41■□□□□ 0.38
CLIC4-203ENST00000489758 TRIOBPQ9H2D6 2365 aa17.41■□□□□ 0.38
CLIC4-203ENST00000489758 LINC01553A4QN01 128 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 CASTOR2A6NHX0 329 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 TULP1O00294 542 aaPredicted RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 C4BPAP04003 597 aaKnown RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 GALTP07902 379 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 IGFBP6P24592 240 aaPredicted RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 GTF2H1P32780 548 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 GCLMP48507 274 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 SLC11A1P49279 550 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 RAB30Q15771 203 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 UPP1Q16831 310 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 DCAF17Q5H9S7 520 aaPredicted RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 TDRD10Q5VZ19 366 aaKnown RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 SPRED2Q7Z698 418 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 USP37Q86T82 979 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 GAS2L3Q86XJ1 694 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 UROC1Q96N76 676 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
CLIC4-203ENST00000489758 SIX4Q9UIU6 781 aa17.4■□□□□ 0.38
CLIC4-203ENST00000489758 ANO9A1A5B4 782 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 BECN2A8MW95 431 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 F8W810 466 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 PPEF2O14830 753 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 XPOTO43592 962 aaKnown RBP17.39■□□□□ 0.37
CLIC4-203ENST00000489758 TMEM191BP0C7N4 346 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 ATP1A3P13637 1013 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 RPL9P32969 192 aaKnown RBP17.39■□□□□ 0.37
CLIC4-203ENST00000489758 PBX3P40426 434 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 CLCNKBP51801 687 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 AP3M2P53677 418 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 BCAR1P56945 870 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 ZACNQ401N2 412 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 CBWD6Q4V339 395 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 CBWD3Q5JTY5 395 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 CBWD5Q5RIA9 395 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 C9orf57Q5W0N0 161 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 CD300LGQ6UXG3 332 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 APTXQ7Z2E3 356 aaKnown RBP17.39■□□□□ 0.37
CLIC4-203ENST00000489758 TRAPPC11Q7Z392 1133 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 COLGALT1Q8NBJ5 622 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 ANKRD36BP1Q96IX9 119 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
CLIC4-203ENST00000489758 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 TMEM8AQ9HCN3 771 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 MARCH5Q9NX47 278 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 LIMA1Q9UHB6 759 aaKnown RBP17.39■□□□□ 0.37
CLIC4-203ENST00000489758 ITGA11Q9UKX5 1188 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.37
CLIC4-203ENST00000489758 PODXLO00592 558 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 PIRO00625 290 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 NRP1O14786 923 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 VNN1O95497 513 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 TNNC2P02585 160 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 ITGB3P05106 788 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 LAG3P18627 525 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 MTIF2P46199 727 aaKnown RBP17.38■□□□□ 0.37
CLIC4-203ENST00000489758 TAP1Q03518 808 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 KRT31Q15323 416 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 MIIPQ5JXC2 388 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 KCNT2Q6UVM3 1135 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
CLIC4-203ENST00000489758 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 C3orf58Q8NDZ4 430 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 BCL7CQ8WUZ0 217 aaPredicted RBP17.38■□□□□ 0.37
CLIC4-203ENST00000489758 DDX27Q96GQ7 796 aaKnown RBP17.38■□□□□ 0.37
CLIC4-203ENST00000489758 ZNF558Q96NG5 402 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 TUBGCP2Q9BSJ2 902 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 NKX2-4Q9H2Z4 354 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
CLIC4-203ENST00000489758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLIC4-203ENST00000489758 LRRC10BA6NIK2 292 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 STX10O60499 249 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 KIF4AO95239 1232 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 ALDH2P05091 517 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 ITGB1P05556 798 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 DNAJB2P25686 324 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 POLR2BP30876 1174 aaKnown RBP17.37■□□□□ 0.37
CLIC4-203ENST00000489758 OR1G1P47890 313 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 FMO5P49326 533 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 MAN2A1Q16706 1144 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 SPOUT1Q5T280 376 aaKnown RBP17.37■□□□□ 0.37
CLIC4-203ENST00000489758 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 C17orf80Q9BSJ5 609 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 RBSNQ9H1K0 784 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 MMRN2Q9H8L6 949 aa17.37■□□□□ 0.37
CLIC4-203ENST00000489758 FNDC1Q4ZHG4 1894 aaPredicted RBP17.36■□□□□ 0.37
CLIC4-203ENST00000489758 NT5C1B-RDH14C9J2C7 533 aa17.36■□□□□ 0.37
CLIC4-203ENST00000489758 TMEM189-UBE2V1I3L0A0 370 aa17.36■□□□□ 0.37
CLIC4-203ENST00000489758 PMM2O15305 246 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms