RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ASXL3Q9C0F0 2248 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 ARNTLO00327 626 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 MSH4O15457 936 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 RPP40O75818 363 aaKnown RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 AKAP5P24588 427 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 OR1D2P34982 312 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 VIPR2P41587 438 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 GCGRP47871 477 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 SOX9P48436 509 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 JAK3P52333 1124 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 RAB33AQ14088 237 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 LRRC32Q14392 662 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 HSP90AA2PQ14568 343 aaPredicted RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PRSS36Q5K4E3 855 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PLA2G4FQ68DD2 849 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 MICU3Q86XE3 530 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 TMTC2Q8N394 836 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PRPF31Q8WWY3 499 aaKnown RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 TMEM143Q96AN5 459 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 ZNF775Q96BV0 537 aaPredicted RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 CPB2Q96IY4 423 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 ZSWIM3Q96MP5 696 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 NXF3Q9H4D5 531 aaKnown RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 AVENQ9NQS1 362 aaPredicted RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 VPS45Q9NRW7 570 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 KLK14Q9P0G3 267 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PCDHGA5Q9Y5G8 931 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PCNX2A6NKB5 2137 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 HYAL3O43820 417 aaPredicted RBP10.23□□□□□ -0.77
SSBP1-212ENST00000489378 EDIL3O43854 480 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 EXTL3O43909 919 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 TSPAN1O60635 241 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 GAS7O60861 476 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 KIF4AO95239 1232 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 PSMC3P17980 439 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 SFNP31947 248 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 CIITAP33076 1130 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 CCR2P41597 374 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 TXNDC11Q6PKC3 985 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 ANO5Q75V66 913 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 PDZD3Q86UT5 571 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 ASB16Q96NS5 453 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 LRRC2Q9BYS8 371 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 GLT8D2Q9H1C3 349 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 GIT1Q9Y2X7 761 aa10.23□□□□□ -0.77
SSBP1-212ENST00000489378 CELSR3Q9NYQ7 3312 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 ATG2BQ96BY7 2078 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 WDR27A2RRH5 827 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CASTOR2A6NHX0 329 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 SLC38A8A6NNN8 435 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CYSRT1A8MQ03 144 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 ZNF263O14978 683 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CCDC192P0DO97 292 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CEACAM1P13688 526 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 MCM5P33992 734 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 LIFRP42702 1097 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 LAMTOR4Q0VGL1 99 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 GRIK3Q13003 919 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 DAB2IPQ5VWQ8 1189 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 MIER3Q7Z3K6 550 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 SLC5A5Q92911 643 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 TMEM87BQ96K49 555 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 BBC3Q96PG8 261 aaPredicted RBP10.22□□□□□ -0.77
SSBP1-212ENST00000489378 RIT2Q99578 217 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CORO1BQ9BR76 489 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 TEKT3Q9BXF9 490 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 CSRNP2Q9H175 543 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 KLK13Q9UKR3 277 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 GPSM3Q9Y4H4 160 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 NEUROG3Q9Y4Z2 214 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 ACACAQ13085 2346 aa10.22□□□□□ -0.77
SSBP1-212ENST00000489378 LNP1A1A4G5 178 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 hCG_1984214I3L0E3 225 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 ERLIN2O94905 339 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 PTPN2P17706 415 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 CSRP1P21291 193 aaKnown RBP10.21□□□□□ -0.78
SSBP1-212ENST00000489378 IGFBP6P24592 240 aaPredicted RBP10.21□□□□□ -0.78
SSBP1-212ENST00000489378 NPEPPSP55786 919 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 DGKKQ5KSL6 1271 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 PKN3Q6P5Z2 889 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 NOTUMQ6P988 496 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 CHD1LQ86WJ1 897 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 ZNF713Q8N859 430 aaPredicted RBP10.21□□□□□ -0.78
SSBP1-212ENST00000489378 RNF149Q8NC42 400 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 DEPDC1BQ8WUY9 529 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 PSPC1Q8WXF1 523 aaKnown RBP10.21□□□□□ -0.78
SSBP1-212ENST00000489378 SMARCD2Q92925 531 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 RSPRY1Q96DX4 576 aa10.21□□□□□ -0.78
SSBP1-212ENST00000489378 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms