RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 FTHL17Q9BXU8 183 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ABHD10Q9NUJ1 306 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 MEIS3P2A8K0S8 358 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 C9IYK1 514 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CST3P01034 146 aaPredicted RBP12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CXCL10P02778 98 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 SKIP12755 728 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 KCNE1P15382 129 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 RFX1P22670 979 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CYP2C18P33260 490 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CCL23P55773 120 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 FAM189BP81408 668 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CCZ1BP86790 482 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
CMSS1-205ENST00000489081 AGMOQ6ZNB7 445 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 ECHDC2Q86YB7 292 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 HELQQ8TDG4 1101 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 SEPT8Q92599 483 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
CMSS1-205ENST00000489081 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
CMSS1-205ENST00000489081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.421e-7■■■■■ 115.4
CMSS1-205ENST00000489081 SIX4Q9UIU6 781 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 MYO6Q9UM54 1294 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 GIT1Q9Y2X7 761 aa12.4□□□□□ -0.42
CMSS1-205ENST00000489081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
CMSS1-205ENST00000489081 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 LRRC53A6NM62 1247 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 PYGBP11216 843 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 JAM2P57087 298 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 MYL6P60660 151 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 TRPC3Q13507 836 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 MEA1Q16626 185 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 TCTN1Q2MV58 587 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 GLRA4Q5JXX5 417 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 SLC24A5Q71RS6 500 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 SYN2Q92777 582 aaPredicted RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 APBB2Q92870 758 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 LPPQ93052 612 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 TATDN2Q93075 761 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 PGBD4Q96DM1 585 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 BAG1Q99933 345 aaPredicted RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 RNF19AQ9NV58 838 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 DPP3Q9NY33 737 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 UBQLN1Q9UMX0 589 aaKnown RBP12.39□□□□□ -0.43
CMSS1-205ENST00000489081 PLAGL2Q9UPG8 496 aa12.39□□□□□ -0.43
CMSS1-205ENST00000489081 KIAA0100Q14667 2235 aaKnown RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 PTGESO14684 152 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 EOMESO95936 686 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 ASS1P00966 412 aaKnown RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 ITGB3P05106 788 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 MLH1P40692 756 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 GCNT1Q02742 428 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 SGSM1Q2NKQ1 1148 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 WDR59Q6PJI9 974 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 KAT5Q92993 513 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 C18orf25Q96B23 403 aaPredicted RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 GAD1Q99259 594 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 GPR88Q9GZN0 384 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 ZNHIT6Q9NWK9 470 aaKnown RBP12.38□□□□□ -0.43
CMSS1-205ENST00000489081 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 TUBGCP4Q9UGJ1 667 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
CMSS1-205ENST00000489081 TRIM43BA6NCK2 446 aa12.37□□□□□ -0.43
CMSS1-205ENST00000489081 ARL5CA6NH57 179 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms