RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 RNF187Q5TA31 235 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 IQSEC1Q6DN90 963 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 KCNK18Q7Z418 384 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 GSPT2Q8IYD1 628 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 NGDNQ8NEJ9 315 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 OR5M3Q8NGP4 307 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 COG1Q8WTW3 980 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 TSPEARQ8WU66 669 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 SNX33Q8WV41 574 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ST8SIA2Q92186 375 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 TSR2Q969E8 191 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 ACAP3Q96P50 834 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ORAI2Q96SN7 254 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 MNTQ99583 582 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 LSM14BQ9BX40 385 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 GPR87Q9BY21 358 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 CPEB1Q9BZB8 566 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 RWDD1Q9H446 243 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 C14orf119Q9NWQ9 140 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 AURKAIP1Q9NWT8 199 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 KLHL42Q9P2K6 505 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 POLKQ9UBT6 870 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 DPP7Q9UHL4 492 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ING1Q9UK53 422 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 CPS1P31327 1500 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 FER1L4A9Z1Z3 1794 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 COL3A1P02461 1466 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 C3P01024 1663 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 TECPR2O15040 1411 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ADAMTS13Q76LX8 1427 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ADGRB2O60241 1585 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 IL16Q14005 1332 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 TTC21BQ7Z4L5 1316 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GOLGA8AA7E2F4 631 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GRXCR1A8MXD5 290 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 PRAMEF4O60810 478 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 MFAP3LO75121 409 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 ITGA10O75578 1167 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 IGHDP01880 384 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GNAT2P19087 354 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GDF5P43026 501 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GPR3P46089 330 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 AMPHP49418 695 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GZMKP49863 264 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 WNT3AP56704 352 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GNAI1P63096 354 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 CCT2P78371 535 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 CDK17Q00537 523 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 MEF2AQ02078 507 aaPredicted RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 TUBA3CQ13748 450 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 CSRP2Q16527 193 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 TUBA3EQ6PEY2 450 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 APBB1IPQ7Z5R6 666 aaPredicted RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 SKAP1Q86WV1 359 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 XYLT1Q86Y38 959 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 ITPRIPQ8IWB1 547 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 GLB1L3Q8NCI6 653 aaPredicted RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 WDR66Q8TBY9 1149 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 IL17RAQ96F46 866 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 SORCS2Q96PQ0 1159 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 CPPED1Q9BRF8 314 aaPredicted RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 QRSL1Q9H0R6 528 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 PCED1AQ9H1Q7 454 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 CHMP4BQ9H444 224 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 SLC2A4RGQ9NR83 387 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 SCOCQ9UIL1 159 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 NOB1Q9ULX3 412 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 PRKAB1Q9Y478 270 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 COL4A3BPQ9Y5P4 624 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 CPSF1Q10570 1443 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 MAP2P11137 1827 aaKnown RBP3.51□□□□□ -1.85
CALD1-221ENST00000489019 AATKQ6ZMQ8 1374 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 PNPLA6Q8IY17 1366 aa3.51□□□□□ -1.85
CALD1-221ENST00000489019 LRRC7Q96NW7 1537 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 TTC21AQ8NDW8 1320 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 KIF16BQ96L93 1317 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 CDK12Q9NYV4 1490 aaPredicted RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 CYR61O00622 381 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 WNT10BO00744 389 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 ADCY6O43306 1168 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 DNAJC6O75061 913 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 FAM20BO75063 409 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 IPO13O94829 963 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 ZNF202O95125 648 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 GYPEP15421 78 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 ERVK-21P61565 698 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 MRPS9P82933 396 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 SRSF2Q01130 221 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 MVPQ14764 893 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 ADRM1Q16186 407 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 MUM1Q2TAK8 710 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 ALDH1L2Q3SY69 923 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 C19orf54Q5BKX5 351 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 DCAF17Q5H9S7 520 aaPredicted RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 TOR2AQ5JU69 321 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 ANKS6Q68DC2 871 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 NAIF1Q69YI7 327 aaPredicted RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 SULT6B1Q6IMI4 303 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 Q6ZVL8 140 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 SPATS2Q86XZ4 545 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms