RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ACAP3Q96P50 834 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC38A7Q9NVC3 462 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LARSQ9P2J5 1176 aaKnown RBP12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CDY1Q9Y6F8 540 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PTPRDP23468 1912 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 WDR27A2RRH5 827 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HNRNPDLO14979 420 aaKnown RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TBC1D4O60343 1298 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 POU2F2P09086 479 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PDCP20941 246 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GBP2P32456 591 aaPredicted RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 OR1D2P34982 312 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SMTNP53814 917 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ROR1Q01973 937 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TDGQ13569 410 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HTR4Q13639 388 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LIN9Q5TKA1 542 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GRASPQ7Z6J2 395 aaPredicted RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 STAMQ92783 540 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 EPSTI1Q96J88 318 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TBX20Q9UMR3 447 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MTMR6Q9Y217 621 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 BACE2Q9Y5Z0 518 aa12.25□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ANHXE9PGG2 379 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 H0YCG3 227 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CCL16O15467 120 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CLDN3O15551 220 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HNRNPA1P09651 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 AVPR2P30518 371 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HELZP42694 1942 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GREB1Q4ZG55 1949 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PPM1LQ5SGD2 360 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 AXDND1Q5T1B0 1012 aaPredicted RBP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC8B1Q6J4K2 584 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MAP4K3Q8IVH8 894 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 BICD1Q96G01 975 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SUSD3Q96L08 255 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CLIC6Q96NY7 704 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PIDD1Q9HB75 910 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 IGSF9Q9P2J2 1179 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
RAB11FIP3-210ENST00000487899 A0A087X0B3 334 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 A0A0B4J269 797 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TISP43B9A030 160 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 K7ELQ4 463 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SYN3O14994 580 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TRAPPC3O43617 180 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TRAK2O60296 914 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TBCAO75347 108 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PPP1R37O75864 691 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 FAM13AO94988 1023 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LAMP2P13473 410 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 NPR3P17342 541 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SCP2P22307 547 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 NMT1P30419 496 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LRPAP1P30533 357 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 RPL9P32969 192 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 AARSP49588 968 aaKnown RBP eCLIP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LIG4P49917 911 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PTPN5P54829 565 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GTF2BQ00403 316 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SPAG1Q07617 926 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MRPL58Q14197 206 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC5A9Q2M3M2 681 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 RASSF8Q8NHQ8 419 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 USP28Q96RU2 1077 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 IKZF4Q9H2S9 585 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 STK17AQ9UEE5 414 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 KCNG1Q9UIX4 513 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ZNF638Q14966 1978 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ZNF292O60281 2723 aa12.23□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ARHGEF37A1IGU5 675 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 KRBA1A5PL33 1030 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PPEF2O14830 753 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 OGTO15294 1046 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ABLIM3O94929 683 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ADRB2P07550 413 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CLTAP09496 248 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 FSHRP23945 695 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MCM4P33991 863 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GUCY2FP51841 1108 aa12.22□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms