RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PCBP1Q15365 356 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRIM56-204ENST00000487252 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 WWC2Q6AWC2 1192 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
TRIM56-204ENST00000487252 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-204ENST00000487252 HEATR3Q7Z4Q2 680 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 TCEAL8Q8IYN2 117 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 LENG9Q96B70 501 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 HHIPQ96QV1 700 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 TMEM209Q96SK2 561 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
TRIM56-204ENST00000487252 CLMPQ9H6B4 373 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 TSPAN1O60635 241 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 AXLP30530 894 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 TRIM61Q5EBN2 209 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 FSTL4Q6MZW2 842 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 PPP1R18Q6NYC8 613 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 YAF2Q8IY57 180 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 CHFRQ96EP1 664 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 SH2D3AQ9BRG2 576 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 CSRNP2Q9H175 543 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
TRIM56-204ENST00000487252 TCEAL9Q9UHQ7 104 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 PTPRDP23468 1912 aa13□□□□□ -0.33
TRIM56-204ENST00000487252 NUP210Q8TEM1 1887 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-204ENST00000487252 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 PTPRQQ9UMZ3 2332 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 APBB3O95704 486 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 ATF2P15336 505 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 AKAP5P24588 427 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 SFNP31947 248 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 GBP1P32455 592 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 MAPK8P45983 427 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 NAB2Q15742 525 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 NOTUMQ6P988 496 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 SLC23A3Q6PIS1 610 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 SYT13Q7L8C5 426 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 LEMD2Q8NC56 503 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 TTC8Q8TAM2 541 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 NUSAP1Q9BXS6 441 aaKnown RBP12.99□□□□□ -0.33
TRIM56-204ENST00000487252 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-204ENST00000487252 PRORYQ9H606 182 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 MBD1Q9UIS9 605 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-204ENST00000487252 PCDH15Q96QU1 1955 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
TRIM56-204ENST00000487252 MGAQ8IWI9 3026 aa12.99□□□□□ -0.33
TRIM56-204ENST00000487252 CASTOR2A6NHX0 329 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 TRDMT1O14717 391 aaKnown RBP12.98□□□□□ -0.33
TRIM56-204ENST00000487252 CD59P13987 128 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 GJA1P17302 382 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 CIITAP33076 1130 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 ADCY7P51828 1080 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 ROR1Q01973 937 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 TEAD2Q15562 447 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 PEAR1Q5VY43 1037 aaPredicted RBP12.98□□□□□ -0.33
TRIM56-204ENST00000487252 ANO5Q75V66 913 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
TRIM56-204ENST00000487252 PIGKQ92643 395 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
TRIM56-204ENST00000487252 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
TRIM56-204ENST00000487252 TMEM74BQ9NUR3 256 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 CEP72Q9P209 647 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 ADAMTS9Q9P2N4 1935 aa12.98□□□□□ -0.33
TRIM56-204ENST00000487252 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 GON4LQ3T8J9 2241 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 CAPN8A6NHC0 703 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 TMEM189-UBE2V1I3L0A0 370 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 RNF40O75150 1001 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 SEC24AO95486 1093 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 CYP21A2P08686 494 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 FTH1P19P0C7X4 201 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 SRGAP2CP0DJJ0 459 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 BCKDHBP21953 392 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 IGFBP6P24592 240 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-204ENST00000487252 JAK3P52333 1124 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 NAPAP54920 295 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 TNK2Q07912 1038 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 LAMTOR4Q0VGL1 99 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 GRSF1Q12849 480 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRIM56-204ENST00000487252 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-204ENST00000487252 AMHR2Q16671 573 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 TMTC3Q6ZXV5 915 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 RDM1Q8NG50 284 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 SHKBP1Q8TBC3 707 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 RILPL2Q969X0 211 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms