RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ELL2O00472 640 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 CYP17A1P05093 508 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 IGFALSP35858 605 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 HNRNPA0Q13151 305 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 SLC39A6Q13433 755 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 SPIDRQ14159 915 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 CSRP2Q16527 193 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 CMTM4Q8IZR5 234 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 PIK3C3Q8NEB9 887 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 PPP1R14CQ8TAE6 165 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 SLC25A43Q8WUT9 341 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 RTF1Q92541 710 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 HAS1Q92839 578 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 CPEB1Q9BZB8 566 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 POFUT1Q9H488 388 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 MTG2Q9H4K7 406 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 ZMAT4Q9H898 229 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 DICER1Q9UPY3 1922 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 KCPQ6ZWJ8 1503 aa5.28□□□□□ -1.56
SNRNP40-205ENST00000486941 UBR2Q8IWV8 1755 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 GRID2IPA4D2P6 1211 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 GLTPD2A6NH11 291 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 H0YIN7 160 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 OPHN1O60890 802 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 PRPF6O94906 941 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 STARD3NLO95772 234 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 ASLP04424 464 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 SERPINB2P05120 415 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 HMOX1P09601 288 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 GAAP10253 952 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 VEGFAP15692 232 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 BMP5P22003 454 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 EIF5P55010 431 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 FAM189BP81408 668 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 SMAD3P84022 425 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 MTHFSDQ2M296 383 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 FNDC3BQ53EP0 1204 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 PIK3R6Q5UE93 754 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 CDCA2Q69YH5 1023 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 SMC1BQ8NDV3 1235 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 TEX13AQ9BXU3 409 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 OXSMQ9NWU1 459 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 NCDNQ9UBB6 729 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 ZBTB1Q9Y2K1 713 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 COL15A1P39059 1388 aa5.27□□□□□ -1.57
SNRNP40-205ENST00000486941 FER1L6Q2WGJ9 1857 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 AHRRA9YTQ3 701 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 OPA1O60313 960 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 ATP2A2P16615 1042 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 HK1P19367 917 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 CANXP27824 592 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 BCAR1P56945 870 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 ADCY2Q08462 1091 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 C2CD5Q86YS7 1000 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 TTC5Q8N0Z6 440 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 CRAMP1Q96RY5 1269 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 LSM14BQ9BX40 385 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 BRIP1Q9BX63 1249 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 PCIF1Q9H4Z3 704 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 FZD1Q9UP38 647 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 ANKRD31Q8N7Z5 1873 aa5.26□□□□□ -1.57
SNRNP40-205ENST00000486941 SIPA1L3O60292 1781 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 LCHNA4D1U4 455 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 H7C1D1 291 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 JMJD7P0C870 316 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 IL6STP40189 918 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 PRELPP51888 382 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 CD69Q07108 199 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 KRT40Q6A162 431 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 ZNF790Q6PG37 636 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 ZNF662Q6ZS27 426 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 IL17REQ8NFR9 667 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 ZNF496Q96IT1 587 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 FDXACB1Q9BRP7 624 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 OSBPL6Q9BZF3 934 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 NPC1L1Q9UHC9 1359 aa5.25□□□□□ -1.57
SNRNP40-205ENST00000486941 KIF7Q2M1P5 1343 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 TIAM2Q8IVF5 1701 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 TMEM191CA6NGB0 347 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 GOLGA6L6A8MZA4 724 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 B4E1Z4 1266 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 MTSS1O43312 755 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 TGM5O43548 720 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 LPXNO60711 386 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 APOL3O95236 402 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 TEFQ10587 303 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 TBC1D9BQ66K14 1250 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 PRR5LQ6MZQ0 368 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 KIAA1841Q6NSI8 718 aa5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 NPM2Q86SE8 214 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 ZNF622Q969S3 477 aaKnown RBP eCLIP5.24□□□□□ -1.57
SNRNP40-205ENST00000486941 MS4A5Q9H3V2 200 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms