RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 TDRD15B5MCY1 1934 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 LRRIQ3A6PVS8 624 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 POMCP01189 267 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 NFICP08651 508 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 CDK11BP21127 795 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 DSC1Q08554 894 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 CETN1Q12798 172 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 TUSC3Q13454 348 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 BTG3Q14201 252 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 ZBTB6Q15916 424 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 MAN2A1Q16706 1144 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 DCAF17Q5H9S7 520 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 IRF2BP1Q8IU81 584 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 SLC35C1Q96A29 364 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 ZMAT2Q96NC0 199 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 TMEM175Q9BSA9 504 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 ITGA11Q9UKX5 1188 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 R3HCC1Q9Y3T6 440 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
ARHGEF3-211ENST00000486829 MYO9BQ13459 2157 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 COL6A3P12111 3177 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 PMM2O15305 246 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 P4HA2O15460 535 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 PAX3P23760 479 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 LRPAP1P30533 357 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 GATMP50440 423 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 MXI1P50539 228 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 TAP1Q03518 808 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 NAB2Q15742 525 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 KRT39Q6A163 491 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 TUBGCP2Q9BSJ2 902 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 CERS4Q9HA82 394 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 AAASQ9NRG9 546 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 MIOSQ9NXC5 875 aa12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-211ENST00000486829 LRRC10BA6NIK2 292 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 RFXAPO00287 272 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 AFPP02771 609 aaKnown RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 TRIM49P0CI25 452 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 TRIM49CP0CI26 452 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 LAG3P18627 525 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 PNPLA4P41247 253 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 WNT7BP56706 349 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 DLG4P78352 724 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 ADGRE1Q14246 886 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 KRT31Q15323 416 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 ZACNQ401N2 412 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 PAN2Q504Q3 1202 aaKnown RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 COL4A4P53420 1690 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
ARHGEF3-211ENST00000486829 GTPBP10A4D1E9 387 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 TMEM189-UBE2V1I3L0A0 370 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 PHACTR2O75167 634 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 ALDH2P05091 517 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 PPM1AP35813 382 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 GCLMP48507 274 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 FMO5P49326 533 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 RBP5P82980 135 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 SOX4Q06945 474 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 BIRC3Q13489 604 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 TRPC3Q13507 836 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
ARHGEF3-211ENST00000486829 HSP90AA4PQ58FG1 418 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms