RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 UBE3AQ05086 875 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 SOX4Q06945 474 aaPredicted RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 BFSP1Q12934 665 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 CCDC40Q4G0X9 1142 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 KLHL23Q8NBE8 558 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 EEF2KMTQ96G04 330 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 DPP3Q9NY33 737 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 ARMCX3Q9UH62 379 aaPredicted RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 PUF60Q9UHX1 559 aaKnown RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
APH1A-208ENST00000486720 PRG3Q9Y2Y8 225 aaPredicted RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 R3HCC1Q9Y3T6 440 aaKnown RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 TDRD15B5MCY1 1934 aaKnown RBP15.86■□□□□ 0.13
APH1A-208ENST00000486720 NT5C1B-RDH14C9J2C7 533 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 H3BNC9 293 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 PODXLO00592 558 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 TADA2AO75478 443 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 FGF18O76093 207 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 B3GAT3O94766 335 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 CAVIN2O95810 425 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 PBX3P40426 434 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 CLCNKBP51801 687 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
APH1A-208ENST00000486720 CLDN10P78369 228 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 GPM6BQ13491 265 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 UPP1Q16831 310 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 ANO6Q4KMQ2 910 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 C11orf57Q6ZUT1 292 aaPredicted RBP15.85■□□□□ 0.13
APH1A-208ENST00000486720 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 ENOX1Q8TC92 643 aaKnown RBP15.85■□□□□ 0.13
APH1A-208ENST00000486720 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 LMAN2LQ9H0V9 348 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 CERS4Q9HA82 394 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 GOLGA2P5Q9HBQ8 144 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 ADAM28Q9UKQ2 775 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 LZTS1Q9Y250 596 aa15.85■□□□□ 0.13
APH1A-208ENST00000486720 LRRIQ3A6PVS8 624 aaPredicted RBP15.84■□□□□ 0.13
APH1A-208ENST00000486720 TRAPPC3O43617 180 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 PNPLA4P41247 253 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 MARSP56192 900 aaKnown RBP15.84■□□□□ 0.13
APH1A-208ENST00000486720 ELAVL2Q12926 359 aaKnown RBP15.84■□□□□ 0.13
APH1A-208ENST00000486720 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
APH1A-208ENST00000486720 C9orf57Q5W0N0 161 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 BORCS6Q96GS4 357 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 ZNF560Q96MR9 790 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 MED15Q96RN5 788 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 BPIFA3Q9BQP9 254 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 FUCA2Q9BTY2 467 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
APH1A-208ENST00000486720 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 MARCH5Q9NX47 278 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 NUB1Q9Y5A7 615 aa15.84■□□□□ 0.13
APH1A-208ENST00000486720 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 KIAA1671Q9BY89 1806 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 PDCD11Q14690 1871 aaKnown RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 ANO9A1A5B4 782 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 KIF4AO95239 1232 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 ITGB1P05556 798 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 GTF2H1P32780 548 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 FXR1P51114 621 aaKnown RBP eCLIP15.83■□□□□ 0.12
APH1A-208ENST00000486720 GUCY2FP51841 1108 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 RBP5P82980 135 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 MYL5Q02045 173 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 PTPROQ16827 1216 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 LMBRD2Q68DH5 695 aaPredicted RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 TRAPPC11Q7Z392 1133 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 SPRED2Q7Z698 418 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 DDX53Q86TM3 631 aaKnown RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 LRRC52Q8N7C0 313 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 C1orf127Q8N9H9 656 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 OR5B17Q8NGF7 314 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 PLEKHO2Q8TD55 490 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 POP1Q99575 1024 aaKnown RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 MAGEC2Q9UBF1 373 aaPredicted RBP15.83■□□□□ 0.12
APH1A-208ENST00000486720 SF3B1O75533 1304 aaKnown RBP eCLIP15.83■□□□□ 0.12
APH1A-208ENST00000486720 PTPRJQ12913 1337 aa15.83■□□□□ 0.12
APH1A-208ENST00000486720 ANK1P16157 1881 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 NLRC5Q86WI3 1866 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 ARHGEF37A1IGU5 675 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 SMTNL1A8MU46 457 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 PIRO00625 290 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 PHACTR2O75167 634 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 ITGB3P05106 788 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 KRT19P08727 400 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 POLR2BP30876 1174 aaKnown RBP15.82■□□□□ 0.12
APH1A-208ENST00000486720 TAF6P49848 677 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 DLG4P78352 724 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 BIRC3Q13489 604 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 TRPC3Q13507 836 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 DCAF17Q5H9S7 520 aaPredicted RBP15.82■□□□□ 0.12
APH1A-208ENST00000486720 FUT10Q6P4F1 479 aa15.82■□□□□ 0.12
APH1A-208ENST00000486720 TMEM173Q86WV6 379 aaPredicted RBP15.82■□□□□ 0.12
APH1A-208ENST00000486720 SPPL3Q8TCT6 385 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms