RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ADAM2Q99965 735 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 TCF25Q9BQ70 676 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 APOL5Q9BWW9 433 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 ADAM7Q9H2U9 754 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 ATP6V0A4Q9HBG4 840 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 ARNT2Q9HBZ2 717 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 RGS18Q9NS28 235 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 C2CD4DB7Z1M9 353 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 C9IYK1 514 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 GOLGA6L22H0YM25 854 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 MEIS2O14770 477 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 CYTH3O43739 400 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 XYLBO75191 536 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 IGHDP01880 384 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 FOSL1P15407 271 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 RRM1P23921 792 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SMARCA1P28370 1054 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 GATA4P43694 442 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 CD151P48509 253 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SLC26A2P50443 739 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 STAT5BP51692 787 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 GPLD1P80108 840 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 WTAPQ15007 396 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 PCSK7Q16549 785 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 TMEM266Q2M3C6 531 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SLC35G1Q2M3R5 365 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ATAT1Q5SQI0 421 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 MTHFD1LQ6UB35 978 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 CYB5R4Q7L1T6 521 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 PLPPR4Q7Z2D5 763 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 RELL1Q8IUW5 271 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ZDHHC14Q8IZN3 488 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 TDRD5Q8NAT2 981 aaKnown RBP7.58□□□□□ -1.2
HDAC3-209ENST00000486618 FRS2Q8WU20 508 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 PIBF1Q8WXW3 757 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ZNF558Q96NG5 402 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 LPIN3Q9BQK8 851 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 RTP3Q9BQQ7 232 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 TMEM117Q9H0C3 514 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ZNF700Q9H0M5 742 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ACBD3Q9H3P7 528 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SEMA4AQ9H3S1 761 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 POMKQ9H5K3 350 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ELAC1Q9H777 363 aaKnown RBP7.58□□□□□ -1.2
HDAC3-209ENST00000486618 ERVK-5Q9HDB9 667 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
HDAC3-209ENST00000486618 TMEM161AQ9NX61 479 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SLC9A2Q9UBY0 812 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 SEC63Q9UGP8 760 aaKnown RBP7.58□□□□□ -1.2
HDAC3-209ENST00000486618 FBXO2Q9UK22 296 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-209ENST00000486618 GINS2Q9Y248 185 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 UBIAD1Q9Y5Z9 338 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
HDAC3-209ENST00000486618 A0A0A0MRY4 1105 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 HIDE1A8MVS5 230 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 IPO5O00410 1097 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 HBP1O60381 514 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 RGS9O75916 674 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 NEFHP12036 1026 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ITGB5P18084 799 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 KLRC1P26715 233 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CDC27P30260 824 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 KIF5BP33176 963 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 NAP1L1P55209 391 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 FAM189BP81408 668 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 TROAPQ12815 778 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 SMC1AQ14683 1233 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 NAA30Q147X3 362 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 PLCB4Q15147 1175 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 TAF11Q15544 211 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 PERM1Q5SV97 790 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 KCNT2Q6UVM3 1135 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 RALYLQ86SE5 291 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ABI1Q8IZP0 508 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 MRPL43Q8N983 215 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ACRBPQ8NEB7 543 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 MYRIPQ8NFW9 859 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CTCFLQ8NI51 663 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 KCNG4Q8TDN1 519 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 TRAPPC12Q8WVT3 735 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ZBTB10Q96DT7 871 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 ASB16Q96NS5 453 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 PCYT2Q99447 389 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 LZTS2Q9BRK4 669 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 SDF4Q9BRK5 362 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CWH43Q9H720 699 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 PSTPIP2Q9H939 334 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 DZANK1Q9NVP4 752 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CLIC5Q9NZA1 410 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 SPG21Q9NZD8 308 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 FRRS1LQ9P0K9 344 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 DBR1Q9UK59 544 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms