RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 MYMKA6NI61 221 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 ZMYND10O75800 440 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 MCM4P33991 863 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 FAM160A1Q05DH4 1040 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 POU5F1BQ06416 359 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 RAD51AP2Q09MP3 1159 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 AMHR2Q16671 573 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 USP41Q3LFD5 358 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 GPR65Q8IYL9 337 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 COLEC11Q9BWP8 271 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 APOL6Q9BWW8 343 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 NXF3Q9H4D5 531 aaKnown RBP19.3■□□□□ 0.68
MCF2L-226ENST00000486210 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.3■□□□□ 0.68
MCF2L-226ENST00000486210 KBTBD4Q9NVX7 518 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 CACNG4Q9UBN1 327 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 NOTCH4Q99466 2003 aa19.3■□□□□ 0.68
MCF2L-226ENST00000486210 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-226ENST00000486210 SLFN14P0C7P3 912 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 CASP1P29466 404 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 NTHL1P78549 312 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 PRSS55Q6UWB4 352 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-226ENST00000486210 DAW1Q8N136 415 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 PYM1Q9BRP8 204 aaKnown RBP19.29■□□□□ 0.68
MCF2L-226ENST00000486210 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
MCF2L-226ENST00000486210 CUEDC2Q9H467 287 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 ADAM28Q9UKQ2 775 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 MTF2Q9Y483 593 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-226ENST00000486210 VWA8A3KMH1 1905 aa19.29■□□□□ 0.68
MCF2L-226ENST00000486210 GOLGA6L22H0YM25 854 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 HIP1RO75146 1068 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 ARF4P18085 180 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-226ENST00000486210 FSHRP23945 695 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 AKAP5P24588 427 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 ARL2P36404 184 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 AFMP43652 599 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 MBTD1Q05BQ5 628 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 MAPK7Q13164 816 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 CAPSQ13938 189 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 RSPO4Q2I0M5 234 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-226ENST00000486210 RTP2Q5QGT7 225 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 KRBA2Q6ZNG9 492 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 DYMQ7RTS9 669 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 GRASPQ7Z6J2 395 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-226ENST00000486210 IFNLR1Q8IU57 520 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-226ENST00000486210 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 ASAP3Q8TDY4 903 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 PAAF1Q9BRP4 392 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 POLR3FQ9H1D9 316 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-226ENST00000486210 TNMDQ9H2S6 317 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 FBXW11Q9UKB1 542 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 CDH7Q9ULB5 785 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 GPR179Q6PRD1 2367 aa19.28■□□□□ 0.68
MCF2L-226ENST00000486210 KANSL1LA0AUZ9 987 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 SFI1A8K8P3 1242 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 KINO60870 393 aaKnown RBP19.27■□□□□ 0.68
MCF2L-226ENST00000486210 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 CDR2LQ86X02 465 aaPredicted RBP19.27■□□□□ 0.68
MCF2L-226ENST00000486210 ZBTB8OSQ8IWT0 167 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 MCPH1Q8NEM0 835 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 DDX12PQ92771 950 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 DNAJC19Q96DA6 116 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 CLSTN3Q9BQT9 956 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 REEP2Q9BRK0 252 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 NFKBIZQ9BYH8 718 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 BLZF1Q9H2G9 400 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 USP25Q9UHP3 1055 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 ZFP37Q9Y6Q3 630 aaPredicted RBP19.27■□□□□ 0.68
MCF2L-226ENST00000486210 NCOR2Q9Y618 2525 aa19.27■□□□□ 0.68
MCF2L-226ENST00000486210 LRRIQ4A6NIV6 560 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 B4GALT5O43286 388 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 PRR29P0C7W0 189 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 GLRA2P23416 452 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 GRIK3Q13003 919 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 MLF2Q15773 248 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-226ENST00000486210 ZNF528Q3MIS6 628 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 SHDQ96IW2 340 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 CNTNAP3BQ96NU0 1288 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 CNTNAP3Q9BZ76 1288 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 MAGEF1Q9HAY2 307 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 KCND2Q9NZV8 630 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 KLK14Q9P0G3 267 aa19.26■□□□□ 0.67
MCF2L-226ENST00000486210 KRT18P05783 430 aaKnown RBP19.25■□□□□ 0.67
MCF2L-226ENST00000486210 CUL4BQ13620 913 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 SLC44A4Q53GD3 710 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 SLC27A1Q6PCB7 646 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 ITFG1Q8TB96 612 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 FGF13Q92913 245 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 TRIM9Q9C026 710 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 C2orf40Q9H1Z8 148 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 PRMT7Q9NVM4 692 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-226ENST00000486210 SPATA6Q9NWH7 488 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-226ENST00000486210 PARP2Q9UGN5 583 aa19.25■□□□□ 0.67
MCF2L-226ENST00000486210 FBXO4Q9UKT5 387 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms