RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ABCB5Q2M3G0 1257 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 AGAP9Q5VTM2 703 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 PCSK4Q6UW60 755 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 RHOT2Q8IXI1 618 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 PPM1NQ8N819 430 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 PRPF38AQ8NAV1 312 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 NRG4Q8WWG1 115 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 STON2Q8WXE9 905 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 JADE3Q92613 823 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 MTMR8Q96EF0 704 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 PHACTR3Q96KR7 559 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 TTPALQ9BTX7 342 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 ACTL7AQ9Y615 435 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 FOXN1O15353 648 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 LPXNO60711 386 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 RAMP2O60895 175 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 NDUFS2O75306 463 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 NDUFA10O95299 355 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 MYBL2P10244 700 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 BMPR1AP36894 532 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 ITKQ08881 620 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 MTM1Q13496 603 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 ACAP2Q15057 778 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 LAIR1Q6GTX8 287 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 ARHGEF19Q8IW93 802 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 CPEB3Q8NE35 698 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 CCHCR1Q8TD31 782 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 DPF2Q92785 391 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 FUBP3Q96I24 572 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 C7orf25Q9BPX7 421 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 SLC23A1Q9UHI7 598 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 SAP30BPQ9UHR5 308 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 TUBD1Q9UJT1 453 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 FPGT-TNNI3KV9GXZ4 949 aa6.18□□□□□ -1.42
SMARCC1-207ENST00000485833 MARCH11A6NNE9 402 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 KATNA1O75449 491 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 POMCP01189 267 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 AMY1AP04745 511 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 HLA-DOAP06340 250 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 KRT85P78386 507 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 FAM50AQ14320 339 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 ZNF529Q6P280 563 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 MED25Q71SY5 747 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 VRK3Q8IV63 474 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 OR56A1Q8NGH5 318 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 REXO4Q9GZR2 422 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 CCDC8Q9H0W5 538 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 KLHL11Q9NVR0 708 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 INTUQ9ULD6 942 aa6.17□□□□□ -1.42
SMARCC1-207ENST00000485833 ATP10BO94823 1461 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 SHTN1A0MZ66 631 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 GRID2IPA4D2P6 1211 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 KLHL33A6NCF5 533 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 FZD9O00144 591 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 GABRDO14764 452 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 XPOTO43592 962 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA12O60330 932 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 CFIP05156 583 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 DDCP20711 480 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 C5AR1P21730 350 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 SLC16A1P53985 500 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 ATP8B2P98198 1209 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 UBXN2BQ14CS0 331 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 MIGA2Q7L4E1 593 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 RHOT1Q8IXI2 618 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 ZGPATQ8N5A5 531 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 MYOCQ99972 504 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 ANKFY1Q9P2R3 1169 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 RUVBL1Q9Y265 456 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA9Q9Y5G4 932 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA8Q9Y5G5 932 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA7Q9Y5G6 932 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA6Q9Y5G7 932 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDHGA3Q9Y5H0 932 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 COL4A3BPQ9Y5P4 624 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 DMRT1Q9Y5R6 373 aa6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 MYBBP1AQ9BQG0 1328 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-207ENST00000485833 NEO1Q92859 1461 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 ZFYVE16Q7Z3T8 1539 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 ARHGEF12Q9NZN5 1544 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 CTTNBP2Q8WZ74 1663 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 B3GALT2O43825 422 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 MXRA7P84157 204 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 GUCY1B3Q02153 619 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 FSTL1Q12841 308 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 TSHZ3Q63HK5 1081 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 ARMC6Q6NXE6 501 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 AGAP2Q99490 1192 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 ADAM2Q99965 735 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 PCDH12Q9NPG4 1184 aa6.15□□□□□ -1.42
SMARCC1-207ENST00000485833 FBXO34Q9NWN3 711 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms