RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	MCCD1	P59942	119 aa	Predicted RBP	13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	PPP3CA	Q08209	521 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	TUSC3	Q13454	348 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	IQCB1	Q15051	598 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	HABP4	Q5JVS0	413 aa	Known RBP	13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	KCNT2	Q6UVM3	1135 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	CD302	Q8IX05	232 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	C1orf127	Q8N9H9	656 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	FAM193B	Q96PV7	902 aa	Predicted RBP	13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	CGRRF1	Q99675	332 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	VN1R3	Q9BXE9	311 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	MRPL9	Q9BYD2	267 aa	Known RBP	13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	TTYH1	Q9H313	450 aa	Predicted RBP	13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	FANCL	Q9NW38	375 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	SIX4	Q9UIU6	781 aa		13.74	□□□□□ -0.21
HDAC7-223	ENST00000485796	MAPK13	O15264	365 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	KRT13	P13646	458 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	TNNI1	P19237	187 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	BMPR1A	P36894	532 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	GCLM	P48507	274 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	VAMP7	P51809	220 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	ERVK-21	P61565	698 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	CLDN10	P78369	228 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	BFSP1	Q12934	665 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	UPP1	Q16831	310 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	EPC2	Q52LR7	807 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	PPP2R2D	Q66LE6	453 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	TAS1R1	Q7RTX1	841 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	LUZP1	Q86V48	1076 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	SLC39A11	Q8N1S5	342 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	KLHL23	Q8NBE8	558 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	FAM200A	Q8TCP9	573 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	TMC2	Q8TDI7	906 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	HASPIN	Q8TF76	798 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	CNOT6L	Q96LI5	555 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	MKNK1	Q9BUB5	465 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	THAP9	Q9H5L6	903 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	MMRN2	Q9H8L6	949 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	DPP3	Q9NY33	737 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	UBQLN1	Q9UMX0	589 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	DERA	Q9Y315	318 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	C2CD2	Q9Y426	696 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	MYO9B	Q13459	2157 aa		13.73	□□□□□ -0.21
HDAC7-223	ENST00000485796	CDH23	Q9H251	3354 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	MYO7A	Q13402	2215 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	KIAA1671	Q9BY89	1806 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796		I3L4J1	428 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	PODXL	O00592	558 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	IKBKB	O14920	756 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	SPTLC1	O15269	473 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	KIF4A	O95239	1232 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	VNN1	O95497	513 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	GNA14	O95837	355 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	CST3	P01034	146 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	C4BPA	P04003	597 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	ALDH2	P05091	517 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	CYP3A5	P20815	502 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	DNAJB1	P25685	340 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	LRPAP1	P30533	357 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	CTNNB1	P35222	781 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	TDRD10	Q5VZ19	366 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	C9orf57	Q5W0N0	161 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	INTS8	Q75QN2	995 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	TRAPPC11	Q7Z392	1133 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	FRMD5	Q7Z6J6	570 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	WDR49	Q8IV35	697 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	FAM114A1	Q8IWE2	563 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	RNF214	Q8ND24	703 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	ARNTL2	Q8WYA1	636 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	SLC35C1	Q96A29	364 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	ZNF558	Q96NG5	402 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	TGS1	Q96RS0	853 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	FNBP1	Q96RU3	617 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	TMEM175	Q9BSA9	504 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	SLC28A3	Q9HAS3	691 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	FAN1	Q9Y2M0	1017 aa		13.72	□□□□□ -0.21
HDAC7-223	ENST00000485796	ANO9	A1A5B4	782 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	GOLGA6L19	H0YKK7	550 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	PIR	O00625	290 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CSPG5	O95196	566 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	ITGB3	P05106	788 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	LAG3	P18627	525 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CDK11B	P21127	795 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	POLR2B	P30876	1174 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	MTIF2	P46199	727 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	BRCC3	P46736	316 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	TPM4	P67936	248 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	SURF1	Q15526	300 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	DUOXA2	Q1HG44	320 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CBWD6	Q4V339	395 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CBWD3	Q5JTY5	395 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CBWD5	Q5RIA9	395 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	CDKAL1	Q5VV42	579 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	TCERG1L	Q5VWI1	586 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	C15orf39	Q6ZRI6	1047 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	SV2A	Q7L0J3	742 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms