RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CCDC149Q6ZUS6 474 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 GALNTL5Q7Z4T8 443 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 CREG2Q8IUH2 290 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 EPHX4Q8IUS5 362 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 TMEM151BQ8IW70 566 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 COLGALT2Q8IYK4 626 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 NRSN1Q8IZ57 195 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 AFAP1Q8N556 730 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.98□□□□□ -1.61
RTN4-213ENST00000485749 TCTN2Q96GX1 697 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 RBM18Q96H35 190 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 TMEM169Q96HH4 297 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 TIGD1Q96MW7 591 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 TSGA13Q96PP4 275 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 ELF4Q99607 663 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 TEX13AQ9BXU3 409 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 WNT8AQ9H1J5 351 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 CCDC68Q9H2F9 335 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 PCIF1Q9H4Z3 704 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 VPS37BQ9H9H4 285 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 TOMM22Q9NS69 142 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 NSMCE4AQ9NXX6 385 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 ZHX1Q9UKY1 873 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 MINPP1Q9UNW1 487 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 EPN1Q9Y6I3 576 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 CCDC88BA6NC98 1476 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 BAZ1BQ9UIG0 1483 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 VPS8Q8N3P4 1428 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 WIZO95785 1651 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 FAM227AF5H4B4 570 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 H0YHG0 523 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 M0QX08 132 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 DVL2O14641 736 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 FGF10O15520 208 aaPredicted RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZBTB43O43298 467 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 KDM1AO60341 852 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PEX10O60683 326 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZBED4O75132 1171 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 TSC22D2O75157 780 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 TUSC2O75896 110 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 MTHFD2P13995 350 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PSMC4P43686 418 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PHKA1P46020 1223 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 NPTX2P47972 431 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 MCM2P49736 904 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PCBP3P57721 371 aaKnown RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 CHRNEQ04844 493 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 IFIT5Q13325 482 aaKnown RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 SEMA5AQ13591 1074 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 SEMA3AQ14563 771 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 SNX17Q15036 470 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 RABL6Q3YEC7 729 aaPredicted RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 TMEM132EQ6IEE7 984 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 TLDC1Q6P9B6 456 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ANGPTL8Q6UXH0 198 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 CYP2R1Q6VVX0 501 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 DPP9Q86TI2 863 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 OSTM1Q86WC4 334 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 NME9Q86XW9 330 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 LRRC49Q8IUZ0 686 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 CMIPQ8IY22 773 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 TBC1D21Q8IYX1 336 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 KIAA0319LQ8IZA0 1049 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 NLGN4XQ8N0W4 816 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 Q8N1Y9 231 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PRR18Q8N4B5 295 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.97□□□□□ -1.61
RTN4-213ENST00000485749 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 DRAXINQ8NBI3 349 aaPredicted RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 SUN5Q8TC36 379 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZNF606Q8WXB4 792 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 DLG3Q92796 817 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PTCHD1Q96NR3 888 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ACO2Q99798 780 aaKnown RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 C7orf25Q9BPX7 421 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 CHCHD6Q9BRQ6 235 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 ZMAT4Q9H898 229 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 AGO4Q9HCK5 861 aaKnown RBP4.97□□□□□ -1.61
RTN4-213ENST00000485749 DNAJC28Q9NX36 388 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 QPCTLQ9NXS2 382 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 DONSONQ9NYP3 566 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 DUSP13Q9UII6 198 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 GPR52Q9Y2T5 361 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 PCDHA11Q9Y5I1 949 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 B3GALT1Q9Y5Z6 326 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 CLIP1P30622 1438 aa4.97□□□□□ -1.61
RTN4-213ENST00000485749 SHISA3A0PJX4 238 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 A6NNZ2 444 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 MASP2O00187 686 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 SGSM2O43147 1006 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 DDHD2O94830 711 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SNX4O95219 450 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 TGDSO95455 350 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 STAMBPO95630 424 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 HSPA4LO95757 839 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms