RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 GRM6O15303 877 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 RB1P06400 928 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 DLG4P78352 724 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 GPM6BQ13491 265 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 STX1AQ16623 288 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 UPP1Q16831 310 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 CD300LGQ6UXG3 332 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 PARD3BQ8TEW8 1205 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 BORCS6Q96GS4 357 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 IGSF21Q96ID5 467 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 VN1R3Q9BXE9 311 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 ANO10Q9NW15 660 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 H3BNC9 293 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 PODXLO00592 558 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 MAPK13O15264 365 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 LPXNO60711 386 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 CSPG5O95196 566 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 KIF4AO95239 1232 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 CYP3A5P20815 502 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 DNAJB1P25685 340 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 SURF1Q15526 300 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 GPR153Q6NV75 609 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 FNBP1Q96RU3 617 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 CGRRF1Q99675 332 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 FUCA2Q9BTY2 467 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 MKNK1Q9BUB5 465 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 COLEC11Q9BWP8 271 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
RPUSD3-217ENST00000485705 XPOTO43592 962 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 B3GAT3O94766 335 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 EPB41P11171 864 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 TNNI1P19237 187 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 LRPAP1P30533 357 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 PPM1AP35813 382 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 VAMP7P51809 220 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 FILIP1Q7Z7B0 1213 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 NT5DC4Q86YG4 428 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 WDR49Q8IV35 697 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 C1orf127Q8N9H9 656 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 TMEM169Q96HH4 297 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 UROC1Q96N76 676 aa16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-217ENST00000485705 ANO9A1A5B4 782 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TADA2AO75478 443 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TRIM49P0CI25 452 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TRIM49CP0CI26 452 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 BRCC3P46736 316 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 CLDN10P78369 228 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 BFSP1Q12934 665 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 CAMK1Q14012 370 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 INTS8Q75QN2 995 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TAS1R1Q7RTX1 841 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 DEFB123Q8N688 67 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TMC2Q8TDI7 906 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 DDX27Q96GQ7 796 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 GPR62Q9BZJ7 368 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
RPUSD3-217ENST00000485705 TMEM189-UBE2V1I3L0A0 370 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 I3L4J1 428 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 PIRO00625 290 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 EFEMP2O95967 443 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 ITGB3P05106 788 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 KRT13P13646 458 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 ERVFC1P60507 584 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 KRT17Q04695 432 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 PPP3CAQ08209 521 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms