RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	TH	P07101	528 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	GNAI3	P08754	354 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	SNRPA1	P09661	255 aa	Known RBP	4.99	□□□□□ -1.61
FN1-222	ENST00000485567	BRAF	P15056	766 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	ATP5J	P18859	108 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	STT3A	P46977	705 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	ALDH1A3	P47895	512 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	SOX8	P57073	446 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	LINC00310	P59036	64 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	GNAI1	P63096	354 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	DAG1	Q14118	895 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	ACAP1	Q15027	740 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	INO80D	Q53TQ3	878 aa	Predicted RBP	4.99	□□□□□ -1.61
FN1-222	ENST00000485567	FAM209B	Q5JX69	171 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	SESTD1	Q86VW0	696 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	PDSS2	Q86YH6	399 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	MYLK4	Q86YV6	388 aa	Predicted RBP	4.99	□□□□□ -1.61
FN1-222	ENST00000485567	RNF152	Q8N8N0	203 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	FBXO18	Q8NFZ0	1043 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	SLC38A3	Q99624	504 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	HERPUD2	Q9BSE4	406 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	NDC1	Q9BTX1	674 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	MRI1	Q9BV20	369 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	C1orf43	Q9BWL3	253 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	NELFA	Q9H3P2	528 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	PNPLA8	Q9NP80	782 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	CFAP97	Q9P2B7	532 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	NCDN	Q9UBB6	729 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	RGS17	Q9UGC6	210 aa	Predicted RBP	4.99	□□□□□ -1.61
FN1-222	ENST00000485567	SLC23A1	Q9UHI7	598 aa		4.99	□□□□□ -1.61
FN1-222	ENST00000485567	PRSS29P	A6NIE9	313 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	CXorf49	A8MYA2	514 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-222	ENST00000485567		B5MCH6	92 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567		F5H423	210 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-222	ENST00000485567	MATN2	O00339	956 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	HOXA3	O43365	443 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-222	ENST00000485567	B4GALT4	O60513	344 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	FGF18	O76093	207 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	MATN4	O95460	622 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	AHSG	P02765	367 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	AMH	P03971	560 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	ANXA1	P04083	346 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	RAP2A	P10114	183 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	TYRP1	P17643	537 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	HDC	P19113	662 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	SLURP1	P55000	103 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	CLRN1	P58418	232 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	RIN1	Q13671	783 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	KIF22	Q14807	665 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	KCNA10	Q16322	511 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	CCDC93	Q567U6	631 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	MCTP1	Q6DN14	999 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	BORA	Q6PGQ7	559 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	PLEKHH3	Q7Z736	793 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	VPS37A	Q8NEZ2	397 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	OR6B3	Q8NGW1	331 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	TCF25	Q9BQ70	676 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	SEC61A2	Q9H9S3	476 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	PPCS	Q9HAB8	311 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	JKAMP	Q9P055	326 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	COL20A1	Q9P218	1284 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	CPNE7	Q9UBL6	633 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	AFF4	Q9UHB7	1163 aa	Known RBP	4.98	□□□□□ -1.61
FN1-222	ENST00000485567	RUVBL1	Q9Y265	456 aa	Known RBP	4.98	□□□□□ -1.61
FN1-222	ENST00000485567	LRCH1	Q9Y2L9	728 aa		4.98	□□□□□ -1.61
FN1-222	ENST00000485567	TRIM43B	A6NCK2	446 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	POM121B	A6NF01	834 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TBKBP1	A7MCY6	615 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	NCK2	O43639	380 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TBC1D4	O60343	1298 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	NOBOX	O60393	691 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	CNOT4	O95628	575 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	PARP1	P09874	1014 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	SBK3	P0C264	359 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TSHR	P16473	764 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TRAPPC10	P48553	1259 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	RAC3	P60763	192 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	HABP2	Q14520	560 aa	Predicted RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	BMT2	Q1RMZ1	405 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	ZNF783	Q6ZMS7	281 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	DOK3	Q7L591	496 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	SKAP1	Q86WV1	359 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	CELF5	Q8N6W0	485 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	SHCBP1	Q8NEM2	672 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	DDX17	Q92841	729 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TNPO1	Q92973	898 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	P2RX7	Q99572	595 aa	Known RBP	4.97	□□□□□ -1.61
FN1-222	ENST00000485567	MYOC	Q99972	504 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	BRIP1	Q9BX63	1249 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	PACSIN1	Q9BY11	444 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	VPS11	Q9H270	941 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	ADAM7	Q9H2U9	754 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	BRD9	Q9H8M2	597 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	CERS4	Q9HA82	394 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	SMURF2	Q9HAU4	748 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	SERHL	Q9NQF3	203 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567	STK32B	Q9NY57	414 aa		4.97	□□□□□ -1.61
FN1-222	ENST00000485567		A0A1W2PRX2	142 aa		4.96	□□□□□ -1.62
FN1-222	ENST00000485567	BTN3A1	O00481	513 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms