RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 DNAAF2Q9NVR5 837 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 SLC6A14Q9UN76 642 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 NR1I2O75469 434 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 TADA2AO75478 443 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 KIF4AO95239 1232 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 MYL4P12829 197 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 MYF5P13349 255 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 ITGA4P13612 1032 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 TLE3Q04726 772 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 TRAF1Q13077 416 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 LPCAT2Q7L5N7 544 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 SYT13Q7L8C5 426 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 GLRX5Q86SX6 157 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 MDGA1Q8NFP4 955 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 EZH1Q92800 747 aaPredicted RBP11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 PGBD1Q96JS3 809 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 PILRBQ9UKJ0 227 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 CDY1Q9Y6F8 540 aa11.22□□□□□ -0.61
EXOSC1-210ENST00000485122 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 ZNF197O14709 1029 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 RRP8O43159 456 aaKnown RBP11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 LYSMD4Q5XG99 296 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 TTC30AQ86WT1 665 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 DEFB119Q8N690 84 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 SHKBP1Q8TBC3 707 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 NLRP4Q96MN2 994 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 GABBR1Q9UBS5 961 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 PCOLCE2Q9UKZ9 415 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 IPPQ9Y573 584 aa11.21□□□□□ -0.61
EXOSC1-210ENST00000485122 AHCTF1Q8WYP5 2266 aa11.21□□□□□ -0.62
EXOSC1-210ENST00000485122 ARHGEF37A1IGU5 675 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 ANTXRLA6NF34 631 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 TERTO14746 1132 aaKnown RBP11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 MICAL2O94851 1124 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 SERPINF2P08697 491 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 HLA-EP13747 358 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 CLDN6P56747 220 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 NFKB2Q00653 900 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 DUOXA1Q1HG43 343 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 RASSF3Q86WH2 238 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 WBP1Q96G27 269 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 KIAA1522Q9P206 1035 aaPredicted RBP11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
EXOSC1-210ENST00000485122 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 OTOL1A6NHN0 477 aaPredicted RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 PRRG1O14668 218 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 HMMRO75330 724 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 DKK1O94907 266 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 PRKCBP05771 671 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CR2P20023 1033 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 HOXA11P31270 313 aaPredicted RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 RHDQ02161 417 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ITPRIPL2Q3MIP1 535 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ARHGAP29Q52LW3 1261 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 IFIT1BQ5T764 474 aaKnown RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ZNF574Q6ZN55 896 aaPredicted RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 RHPN2Q8IUC4 686 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 SPACA3Q8IXA5 215 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 GALNT15Q8N3T1 639 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 TTC9Q92623 222 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 NXPE2Q96DL1 559 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CNOT6LQ96LI5 555 aaKnown RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 SH2D3AQ9BRG2 576 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 RNF41Q9H4P4 317 aaPredicted RBP11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 CPNE5Q9HCH3 593 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 MTRRQ9UBK8 725 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 FBN2P35556 2912 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
EXOSC1-210ENST00000485122 TMEM150BA6NC51 233 aa11.18□□□□□ -0.62
EXOSC1-210ENST00000485122 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
EXOSC1-210ENST00000485122 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
EXOSC1-210ENST00000485122 DHX15O43143 795 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms