RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	CATSPERE	Q5SY80	951 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	GJC2	Q5T442	439 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	ESRP1	Q6NXG1	681 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	TPH2	Q8IWU9	490 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	SMC5	Q8IY18	1101 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	ASB15	Q8WXK1	588 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	RPGR	Q92834	1020 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	GFM2	Q969S9	779 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	PAWR	Q96IZ0	340 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	TUBGCP5	Q96RT8	1024 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	MAN1C1	Q9NR34	630 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	EIF2B4	Q9UI10	523 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	GPR45	Q9Y5Y3	372 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	WDR91	A4D1P6	747 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	SYNJ1	O43426	1573 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	TOX4	O94842	621 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	VSIG10L2	P0DP72	767 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	GNAT2	P19087	354 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	AGXT	P21549	392 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	APEX1	P27695	318 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	MANF	P55145	182 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	BCAR1	P56945	870 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	SRSF4	Q08170	494 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	PICALM	Q13492	652 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	GBX1	Q14549	363 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	PDCD1	Q15116	288 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	VPS72	Q15906	364 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ANO4	Q32M45	955 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ARHGAP29	Q52LW3	1261 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	RRP12	Q5JTH9	1297 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	IFIT1B	Q5T764	474 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	KSR2	Q6VAB6	950 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	AUTS2	Q8WXX7	1259 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	RTF1	Q92541	710 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ARL8A	Q96BM9	186 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ZNF496	Q96IT1	587 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	TEKT5	Q96M29	485 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	FOXB1	Q99853	325 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	AKIP1	Q9NQ31	210 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	SAP30BP	Q9UHR5	308 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	DENND2A	Q9ULE3	1009 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	ZBTB21	Q9ULJ3	1066 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	NUMBL	Q9Y6R0	609 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	SALL3	Q9BXA9	1300 aa		4.93	□□□□□ -1.62
VPS8-223	ENST00000485024	LOC102724159	A0A0B4J2E5	919 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	PIPSL	A2A3N6	862 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	PRAMEF22	A3QJZ6	481 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	GOLGA6L22	H0YM25	854 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	TRIM27	P14373	513 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	LPO	P22079	712 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	MAP3K12	Q12852	859 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	SPIDR	Q14159	915 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	PWP2	Q15269	919 aa	Known RBP	4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	FAM214A	Q32MH5	1076 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	CCDC178	Q5BJE1	867 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	FAM180A	Q6UWF9	173 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	CERS3	Q8IU89	383 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	EXOC8	Q8IYI6	725 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	CAGE1	Q8TC20	777 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	PMM1	Q92871	262 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	NKD2	Q969F2	451 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	SARG	Q9BW04	601 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	FAM204A	Q9H8W3	233 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	SEMA4G	Q9NTN9	838 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	MAPKBP1	O60336	1514 aa		4.92	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA12	O60330	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	CTNND1	O60716	968 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PRPF6	O94906	941 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	NDUFA10	O95299	355 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ESRRB	O95718	433 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	CBSL	P0DN79	551 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	APOBEC3A	P31941	199 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	CBS	P35520	551 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	MPL	P40238	635 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	MTNR1B	P49286	362 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	GPR15	P49685	360 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ANTXR2	P58335	489 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ALDH6A1	Q02252	535 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ADCY2	Q08462	1091 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	BEAN1	Q3B7T3	259 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PRAMEF9	Q5VWM5	478 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	SLFN12L	Q6IEE8	588 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	FSTL4	Q6MZW2	842 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	KIAA1841	Q6NSI8	718 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	SRGAP1	Q7Z6B7	1085 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ARHGEF25	Q86VW2	580 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	TGFBRAP1	Q8WUH2	860 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	JADE3	Q92613	823 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ERCC4	Q92889	916 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	MAP3K14	Q99558	947 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	DUSP26	Q9BV47	211 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ANO3	Q9BYT9	981 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	CPEB1	Q9BZB8	566 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	TRPM5	Q9NZQ8	1165 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	SAE1	Q9UBE0	346 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	SYNPO2	Q9UMS6	1093 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms