RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 FAM213AQ9BRX8 229 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 PCIF1Q9H4Z3 704 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNX17-206ENST00000484886 CHST7Q9NS84 486 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 FAM237AA0A1B0GTK4 181 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 I3L4J1 428 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 TEX28O15482 410 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 MBTPS2O43462 519 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 LILRB3O75022 631 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 GARTP22102 1010 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 BRCC3P46736 316 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 KCNC3Q14003 757 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 TMEM132DQ14C87 1099 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 RTP2Q5QGT7 225 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 JADE1Q6IE81 842 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 TMEM184AQ6ZMB5 413 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 KRBA2Q6ZNG9 492 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 C3orf58Q8NDZ4 430 aa20.79■□□□□ 0.92
SNX17-206ENST00000484886 CCDC47Q96A33 483 aaKnown RBP20.79■□□□□ 0.92
SNX17-206ENST00000484886 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.79■□□□□ 0.92
SNX17-206ENST00000484886 SPTBN5Q9NRC6 3674 aaKnown RBP20.79■□□□□ 0.92
SNX17-206ENST00000484886 UBE4BO95155 1302 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 XIRP2A4UGR9 3374 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 GOLGA8IPA6NC78 632 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 GOLGA8JA6NMD2 632 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 ZNF202O95125 648 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 LDHAP00338 332 aaKnown RBP20.78■□□□□ 0.92
SNX17-206ENST00000484886 MYL1P05976 194 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 NFICP08651 508 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 RPL17P18621 184 aaKnown RBP20.78■□□□□ 0.92
SNX17-206ENST00000484886 IGFBP6P24592 240 aaPredicted RBP20.78■□□□□ 0.92
SNX17-206ENST00000484886 MCM4P33991 863 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 PSMD5Q16401 504 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 KMT5BQ4FZB7 885 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.78■□□□□ 0.92
SNX17-206ENST00000484886 SMRP1Q8NCR6 262 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 BEST2Q8NFU1 509 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 TSPAN18Q96SJ8 248 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 CBWD1Q9BRT8 395 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 DZANK1Q9NVP4 752 aa20.78■□□□□ 0.92
SNX17-206ENST00000484886 USP15Q9Y4E8 981 aaPredicted RBP20.78■□□□□ 0.92
SNX17-206ENST00000484886 GLUD1P00367 558 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 HOXB8P17481 243 aaPredicted RBP20.77■□□□□ 0.92
SNX17-206ENST00000484886 CLCN4P51793 760 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 GUCY2FP51841 1108 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 EHHADHQ08426 723 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 PDXDC1Q6P996 788 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 EPM2AIP1Q7L775 607 aaPredicted RBP20.77■□□□□ 0.92
SNX17-206ENST00000484886 PALB2Q86YC2 1186 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 TMEM130Q8N3G9 435 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 ZNF507Q8TCN5 953 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 SLC22A17Q8WUG5 538 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 FBXL18Q96ME1 805 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 ASB7Q9H672 318 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 RXFP1Q9HBX9 757 aa20.77■□□□□ 0.92
SNX17-206ENST00000484886 KLRC4O43908 158 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 EXTL3O43909 919 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 IL18RAPO95256 599 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 RPN1P04843 607 aaKnown RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 PRR29P0C7W0 189 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 CYP3A5P20815 502 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 TKTP29401 623 aaKnown RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 SMAD2Q15796 467 aaKnown RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 RARS2Q5T160 578 aaKnown RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 ELMSAN1Q6PJG2 1045 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 CRELD2Q6UXH1 353 aaPredicted RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 HS2ST1Q7LGA3 356 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 GPR65Q8IYL9 337 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 GPD1LQ8N335 351 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 C12orf76Q8N812 135 aaPredicted RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 ZSWIM2Q8NEG5 633 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 SCFD1Q8WVM8 642 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 PIK3R5Q8WYR1 880 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 RBAKQ9NYW8 714 aaPredicted RBP20.76■□□□□ 0.91
SNX17-206ENST00000484886 CHMP5Q9NZZ3 219 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 FNIP2Q9P278 1114 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 DERAQ9Y315 318 aa20.76■□□□□ 0.91
SNX17-206ENST00000484886 ANK1P16157 1881 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 KIAA0391O15091 583 aaKnown RBP20.75■□□□□ 0.91
SNX17-206ENST00000484886 ADRB2P07550 413 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 SPATA31D3P0C874 917 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 FGFR3P22607 806 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 LRPAP1P30533 357 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 SSTR3P32745 418 aaPredicted RBP20.75■□□□□ 0.91
SNX17-206ENST00000484886 HOXD13P35453 343 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 PSMD2Q13200 908 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 ZBTB6Q15916 424 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 CES5AQ6NT32 575 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 KANK3Q6NY19 840 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 SYCE2Q6PIF2 218 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 SPATA31D4Q6ZUB0 917 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 BRSK2Q8IWQ3 736 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 MAN1C1Q9NR34 630 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 HSPBP1Q9NZL4 362 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 DPP7Q9UHL4 492 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 C2CD2Q9Y426 696 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 A0A0C4DFX4 3053 aa20.75■□□□□ 0.91
SNX17-206ENST00000484886 VWA8A3KMH1 1905 aa20.74■□□□□ 0.91
SNX17-206ENST00000484886 CYP2J2P51589 502 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms