RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, human

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB4-209	ENST00000484594	LRRC52	Q8N7C0	313 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	ZNF516	Q92618	1163 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	SNX27	Q96L92	541 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	SYT11	Q9BT88	431 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	GPR88	Q9GZN0	384 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	DEF6	Q9H4E7	631 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	CDY2A	Q9Y6F7	541 aa		11.72	□□□□□ -0.53
ERBB4-209	ENST00000484594	GRIN2D	O15399	1336 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594		A0A0A6YYK5	440 aa	Predicted RBP	11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	CD4	P01730	458 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	NCOA4	Q13772	614 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	TRIM72	Q6ZMU5	477 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	TRAPPC11	Q7Z392	1133 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	CTU1	Q7Z7A3	348 aa	Known RBP	11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	MRPL10	Q7Z7H8	261 aa	Known RBP	11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	ZSWIM2	Q8NEG5	633 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	SPATA18	Q8TC71	538 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	TAS1R2	Q8TE23	839 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	ARMC5	Q96C12	935 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	OSMR	Q99650	979 aa		11.71	□□□□□ -0.53
ERBB4-209	ENST00000484594	TTLL13P	A6NNM8	815 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	PITPNM1	O00562	1244 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	GZMA	P12544	262 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	PNPLA4	P41247	253 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	BFSP2	Q13515	415 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	TMEM132D	Q14C87	1099 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	ZBTB6	Q15916	424 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	MYCBP	Q99417	103 aa	Predicted RBP	11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	FTHL17	Q9BXU8	183 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	ERVK-5	Q9HDB9	667 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	NLRC4	Q9NPP4	1024 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	STARD7	Q9NQZ5	370 aa		11.71	□□□□□ -0.54
ERBB4-209	ENST00000484594	AKR1B10	O60218	316 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	RPS6KA5	O75582	802 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	VNN1	O95497	513 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	ACTN1	P12814	892 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TNNT3	P45378	269 aa	Predicted RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	IFI16	Q16666	785 aa	Known RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	ZBTB33	Q86T24	672 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	FAM228A	Q86W67	206 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	UBR7	Q8N806	425 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	CEP120	Q8N960	986 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TOX2	Q96NM4	488 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	CHP1	Q99653	195 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	NIF3L1	Q9GZT8	377 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	SLC38A7	Q9NVC3	462 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	UBQLN1	Q9UMX0	589 aa	Known RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TLR3	O15455	904 aa	Known RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	EVI5	O60447	810 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	PHACTR2	O75167	634 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	EIF4A3	P38919	411 aa	Known RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	BIRC3	Q13489	604 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TRPC3	Q13507	836 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	CUL2	Q13617	745 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	NAB2	Q15742	525 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	SLC10A6	Q3KNW5	377 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	FBXO47	Q5MNV8	452 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	BEST2	Q8NFU1	509 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	SEMA4D	Q92854	862 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TRIM6	Q9C030	488 aa	Predicted RBP	11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	LCMT1	Q9UIC8	334 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	GIT1	Q9Y2X7	761 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TRIP11	Q15643	1979 aa		11.7	□□□□□ -0.54
ERBB4-209	ENST00000484594	TDRD15	B5MCY1	1934 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ATF7	P17544	494 aa	Predicted RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	TNFSF9	P41273	254 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	NOP2	P46087	812 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ETF1	P62495	437 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	NOP14	P78316	857 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	RBP5	P82980	135 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	DSC3	Q14574	896 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	TDRD12	Q587J7	1177 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	UBXN11	Q5T124	520 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	TOGARAM2	Q6ZUX3	1019 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	THNSL1	Q8IYQ7	743 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	SLC30A5	Q8TAD4	765 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	APBB2	Q92870	758 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	PGBD4	Q96DM1	585 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	BCO2	Q9BYV7	579 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	PCDHB2	Q9Y5E7	798 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	LACTBL1	A8MY62	500 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	NPTXR	O95502	500 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	KIF5A	Q12840	1032 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	PTPN21	Q16825	1174 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ARHGAP29	Q52LW3	1261 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	FAM47C	Q5HY64	1035 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ZBTB41	Q5SVQ8	909 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ANKRD33	Q7Z3H0	272 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	EGFL6	Q8IUX8	553 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	CPB2	Q96IY4	423 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	ZNF560	Q96MR9	790 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	NCAPG	Q9BPX3	1015 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	KIAA1257	Q9ULG3	409 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	PIN4	Q9Y237	131 aa	Known RBP	11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	NOD1	Q9Y239	953 aa		11.69	□□□□□ -0.54
ERBB4-209	ENST00000484594	KIF5C	O60282	957 aa		11.68	□□□□□ -0.54
ERBB4-209	ENST00000484594	CHRNA1	P02708	482 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms