RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MSTO1Q9BUK6 570 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 MRPL44Q9H9J2 332 aaKnown RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 PANK4Q9NVE7 773 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 TUBGCP4Q9UGJ1 667 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 DOCK6Q96HP0 2047 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 CCDC195A0A1B0GUA6 201 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 ADAM12O43184 909 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 TRAPPC3O43617 180 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 GPR37L1O60883 481 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 RFPL2O75678 378 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 C1RP00736 705 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 ADRB2P07550 413 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 ME1P48163 572 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 CASP5P51878 434 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 PPP2R3AQ06190 1150 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 DHX58Q96C10 678 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 HVCN1Q96D96 273 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 LRFN3Q9BTN0 628 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 PLEKHA4Q9H4M7 779 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 RPF1Q9H9Y2 349 aaKnown RBP14.05□□□□□ -0.16
HDAC1-209ENST00000484305 OLFML3Q9NRN5 406 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 DPP7Q9UHL4 492 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 CPSF3Q9UKF6 684 aaKnown RBP14.05□□□□□ -0.16
HDAC1-209ENST00000484305 RCOR1Q9UKL0 485 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 CFAP45Q9UL16 551 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 NR2E1Q9Y466 385 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 STYXL1Q9Y6J8 313 aa14.05□□□□□ -0.16
HDAC1-209ENST00000484305 C2CD4DB7Z1M9 353 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 GCNT3O95395 438 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 ADSSP30520 456 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 OR1D2P34982 312 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 ACOT2P49753 483 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 ZBTB6Q15916 424 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 TMEM31Q5JXX7 168 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 L1TD1Q5T7N2 865 aaKnown RBP14.04□□□□□ -0.16
HDAC1-209ENST00000484305 RESP18Q5W5W9 173 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 ADALQ6DHV7 355 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 PDXDC1Q6P996 788 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 RSPO2Q6UXX9 243 aaPredicted RBP14.04□□□□□ -0.16
HDAC1-209ENST00000484305 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 KREMEN2Q8NCW0 462 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 CMASQ8NFW8 434 aaPredicted RBP14.04□□□□□ -0.16
HDAC1-209ENST00000484305 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 TNMDQ9H2S6 317 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 CUEDC2Q9H467 287 aa14.04□□□□□ -0.16
HDAC1-209ENST00000484305 TRIOO75962 3097 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 POLR2DO15514 142 aaKnown RBP14.03□□□□□ -0.16
HDAC1-209ENST00000484305 GUCY2FP51841 1108 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 JADE1Q6IE81 842 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 ANKS3Q6ZW76 656 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 ZNF707Q96C28 371 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-209ENST00000484305 ACCSQ96QU6 501 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 LRRC27Q9C0I9 530 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 MTRRQ9UBK8 725 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 AGO2Q9UKV8 859 aaKnown RBP14.03□□□□□ -0.16
HDAC1-209ENST00000484305 UBQLN1Q9UMX0 589 aaKnown RBP14.03□□□□□ -0.16
HDAC1-209ENST00000484305 EXOC7Q9UPT5 735 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 NUB1Q9Y5A7 615 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 CDY1Q9Y6F8 540 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 TECTAO75443 2155 aa14.03□□□□□ -0.16
HDAC1-209ENST00000484305 PAPLNO95428 1278 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 CYP3A5P20815 502 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 LRPAP1P30533 357 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 MCM4P33991 863 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 RAB33AQ14088 237 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 VARS2Q5ST30 1063 aaKnown RBP14.02□□□□□ -0.17
HDAC1-209ENST00000484305 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-209ENST00000484305 CD302Q8IX05 232 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 GLIS3Q8NEA6 775 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 ZSWIM2Q8NEG5 633 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 SMG7Q92540 1137 aaKnown RBP14.02□□□□□ -0.17
HDAC1-209ENST00000484305 HPS3Q969F9 1004 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 SUSD3Q96L08 255 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 FAM13BQ9NYF5 915 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 USTQ9Y2C2 406 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 BACE2Q9Y5Z0 518 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 SCN1AP35498 2009 aa14.02□□□□□ -0.17
HDAC1-209ENST00000484305 PPEF2O14830 753 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 SYN3O14994 580 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ZMYND10O75800 440 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 PRPF6O94906 941 aaKnown RBP14.01□□□□□ -0.17
HDAC1-209ENST00000484305 NFICP08651 508 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 COL9A1P20849 921 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 CASP1P29466 404 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ASIC1P78348 528 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ZXDAP98168 799 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms