RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RUVBL1Q9Y265 456 aaKnown RBP6.09□□□□□ -1.43
SCAF11-207ENST00000484275 PCDHGA2Q9Y5H1 932 aa6.09□□□□□ -1.43
SCAF11-207ENST00000484275 ENDOD1O94919 500 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 CKBP12277 381 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 SOX5P35711 763 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 MASP1P48740 699 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 ELLP55199 621 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-207ENST00000484275 ATP8B2P98198 1209 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 CCHCR1Q8TD31 782 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 AIFM2Q9BRQ8 373 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 DUSP26Q9BV47 211 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 SEMA4GQ9NTN9 838 aa6.08□□□□□ -1.44
SCAF11-207ENST00000484275 POLR2AP24928 1970 aaKnown RBP6.07□□□□□ -1.44
SCAF11-207ENST00000484275 TCRBV7S2A1N4TA0A589 114 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 GPR32O75388 356 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 VAV2P52735 878 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 SLFN5Q08AF3 891 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 Q8NA96 180 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 CHAC2Q8WUX2 184 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 PTCD3Q96EY7 689 aaKnown RBP6.07□□□□□ -1.44
SCAF11-207ENST00000484275 AHCYL2Q96HN2 611 aaKnown RBP6.07□□□□□ -1.44
SCAF11-207ENST00000484275 SLC2A13Q96QE2 648 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 SPATA5L1Q9BVQ7 753 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 GSTO2Q9H4Y5 243 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 FRMD4BQ9Y2L6 1034 aa6.07□□□□□ -1.44
SCAF11-207ENST00000484275 MTO1Q9Y2Z2 717 aaKnown RBP6.07□□□□□ -1.44
SCAF11-207ENST00000484275 ARHGEF17Q96PE2 2063 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-207ENST00000484275 CDHR4A6H8M9 788 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 LRRC3CA6NJW4 275 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 ERVK-21P61565 698 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 MRPS35P82673 323 aaKnown RBP6.06□□□□□ -1.44
SCAF11-207ENST00000484275 GEN1Q17RS7 908 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 COG1Q8WTW3 980 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 DPF2Q92785 391 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 NELL1Q92832 810 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 KCTD5Q9NXV2 234 aa6.06□□□□□ -1.44
SCAF11-207ENST00000484275 TLDC2A0PJX2 215 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 MYADML2A6NDP7 307 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 INO80B-WBP1J3KQ70 363 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 RBMXL2O75526 392 aaKnown RBP6.05□□□□□ -1.44
SCAF11-207ENST00000484275 C1RP00736 705 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 SLC5A3P53794 718 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 TAF7LQ5H9L4 462 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 SP5Q6BEB4 398 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-207ENST00000484275 ARHGEF25Q86VW2 580 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 LNX2Q8N448 690 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 DCBLD1Q8N8Z6 715 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 ACTRT2Q8TDY3 377 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 SSH3Q8TE77 659 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 INO80BQ9C086 356 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-207ENST00000484275 KLK15Q9H2R5 256 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 VSX1Q9NZR4 365 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-207ENST00000484275 ZBTB21Q9ULJ3 1066 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 DNM3Q9UQ16 869 aa6.05□□□□□ -1.44
SCAF11-207ENST00000484275 GPR39O43194 453 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 TEX33O43247 280 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 FCER1AP12319 257 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 DDCP20711 480 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 SLC6A4P31645 630 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 CACNA2D1P54289 1103 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 NHLH1Q02575 133 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 GIMAP6Q6P9H5 292 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 FOXR2Q6PJQ5 311 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 FITM2Q8N6M3 262 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 ZNF384Q8TF68 577 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 NUP133Q8WUM0 1156 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 CYFIP2Q96F07 1278 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 FAM126AQ9BYI3 521 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-207ENST00000484275 LRIT1Q9P2V4 623 aa6.04□□□□□ -1.44
SCAF11-207ENST00000484275 MYBBP1AQ9BQG0 1328 aaKnown RBP6.03□□□□□ -1.44
SCAF11-207ENST00000484275 FAM171A2A8MVW0 826 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 KIAA0391O15091 583 aaKnown RBP6.03□□□□□ -1.44
SCAF11-207ENST00000484275 ERN1O75460 977 aaKnown RBP6.03□□□□□ -1.44
SCAF11-207ENST00000484275 HSD3B2P26439 372 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 FAPQ12884 760 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 FOXF2Q12947 444 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 DACT2Q5SW24 774 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-207ENST00000484275 TBC1D15Q8TC07 691 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 PNKPQ96T60 521 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 ZNF277Q9NRM2 450 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-207ENST00000484275 IL17RBQ9NRM6 502 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 GPR45Q9Y5Y3 372 aa6.03□□□□□ -1.44
SCAF11-207ENST00000484275 ALAS1P13196 640 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 POU3F3P20264 500 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-207ENST00000484275 AGXTP21549 392 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 KRTAP10-11P60412 298 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 CT47A1Q5JQC4 288 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-207ENST00000484275 GLCCI1Q86VQ1 547 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 COLGALT2Q8IYK4 626 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 WDR66Q8TBY9 1149 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 RAB24Q969Q5 203 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 TLR10Q9BXR5 811 aa6.02□□□□□ -1.45
SCAF11-207ENST00000484275 SLKQ9H2G2 1235 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-207ENST00000484275 SBK3P0C264 359 aa6.01□□□□□ -1.45
SCAF11-207ENST00000484275 SF3B3Q15393 1217 aaKnown RBP6.01□□□□□ -1.45
SCAF11-207ENST00000484275 NPM2Q86SE8 214 aaKnown RBP6.01□□□□□ -1.45
SCAF11-207ENST00000484275 PPM1NQ8N819 430 aa6.01□□□□□ -1.45
SCAF11-207ENST00000484275 NRG4Q8WWG1 115 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms