RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 FAM117BQ6P1L5 589 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 ACAD11Q709F0 780 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 SLC24A5Q71RS6 500 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-207ENST00000483969 FAM228AQ86W67 206 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 KSR1Q8IVT5 923 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 SYT2Q8N9I0 419 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-207ENST00000483969 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 GALNT11Q8NCW6 608 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 KCNG4Q8TDN1 519 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 TMEM40Q8WWA1 233 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 KIFAP3Q92845 792 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 IFT74Q96LB3 600 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 PLIN2Q99541 437 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 ADAM2Q99965 735 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 LACRTQ9GZZ8 138 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 POLR3FQ9H1D9 316 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-207ENST00000483969 XPNPEP1Q9NQW7 623 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 RGS18Q9NS28 235 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 CUTAO60888 179 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 SSBP05455 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL8A1-207ENST00000483969 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 GLRA2P23416 452 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 SARSP49591 514 aaKnown RBP9.84□□□□□ -0.83
COL8A1-207ENST00000483969 RABGGTBP53611 331 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 PTENP60484 403 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 FAM189BP81408 668 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 GRIN1Q05586 938 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 PKP1Q13835 747 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 TMEM119Q4V9L6 283 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 CATSPER4Q7RTX7 472 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 ZBTB8OSQ8IWT0 167 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 KLHL23Q8NBE8 558 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 GPR152Q8TDT2 470 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 CLP1Q92989 425 aaKnown RBP9.84□□□□□ -0.83
COL8A1-207ENST00000483969 CLIC6Q96NY7 704 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 KRTAP4-12Q9BQ66 201 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 NFKBIZQ9BYH8 718 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 C2orf40Q9H1Z8 148 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 TMX1Q9H3N1 280 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 IFT122Q9HBG6 1241 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 DACT1Q9NYF0 836 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 KCND2Q9NZV8 630 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 RCOR1Q9UKL0 485 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 MYH7BA7E2Y1 1941 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 ALPK3Q96L96 1907 aa9.84□□□□□ -0.83
COL8A1-207ENST00000483969 INO80B-WBP1J3KQ70 363 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 CSDE1O75534 798 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 WISP1O95388 367 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 AXLP30530 894 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 KRT85P78386 507 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 HTRA4P83105 476 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 DNM1Q05193 864 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 DSC3Q14574 896 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 NAA30Q147X3 362 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 KARSQ15046 597 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 PDE12Q6L8Q7 609 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 RINT1Q6NUQ1 792 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 CCDC73Q6ZRK6 1079 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 C1orf186Q6ZWK4 172 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 NPAS4Q8IUM7 802 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 DEPTORQ8TB45 409 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 ASAP3Q8TDY4 903 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 EPSTI1Q96J88 318 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 DRC1Q96MC2 740 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 YME1L1Q96TA2 773 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 RASSF4Q9H2L5 321 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 NKX2-4Q9H2Z4 354 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 ELAC1Q9H777 363 aaKnown RBP9.83□□□□□ -0.84
COL8A1-207ENST00000483969 C17orf75Q9HAS0 396 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 GPRC5CQ9NQ84 441 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 STOML1Q9UBI4 398 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
COL8A1-207ENST00000483969 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 A0A0U1RQF3 1178 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 LRRIQ4A6NIV6 560 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 C9IYK1 514 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 ERLIN2O94905 339 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 EOMESO95936 686 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 PLCG1P19174 1290 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 NCLP19338 710 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 FGFR4P22455 802 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 SSTR4P31391 388 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 NAMPTP43490 491 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 ME1P48163 572 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 EFNA5P52803 228 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 SLC12A3P55017 1021 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 CAPSQ13938 189 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 DHX8Q14562 1220 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms