RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MYH11P35749 1972 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ZNFX1Q9P2E3 1918 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 GBF1Q92538 1859 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ADGRA3Q8IWK6 1321 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TRIOO75962 3097 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ANO9A1A5B4 782 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CTAGE9A4FU28 777 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 RRN3P2A6NIE6 340 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 A6NJR5 290 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ACKR2O00590 384 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF263O14978 683 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 HNRNPDLO14979 420 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TOM1L1O75674 476 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 SLU7O95391 586 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TMOD1P28289 359 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 SOX5P35711 763 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 LIG4P49917 911 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 GPC3P51654 580 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 KIF11P52732 1056 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CYP24A1Q07973 514 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 LAMTOR4Q0VGL1 99 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 MKRN4PQ13434 485 aaPredicted RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 BMS1Q14692 1282 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 PSMD6Q15008 389 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 PCBP1Q15365 356 aaKnown RBP eCLIP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 NAB2Q15742 525 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ASIC2Q16515 512 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 MAPK6Q16659 721 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 DGKDQ16760 1214 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 KYAT1Q16773 422 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CBWD6Q4V339 395 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CBWD3Q5JTY5 395 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CBWD5Q5RIA9 395 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 C1orf220Q5T0J3 134 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CCDC122Q5T0U0 273 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 SLC39A4Q6P5W5 647 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 C15orf39Q6ZRI6 1047 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TSHZ1Q6ZSZ6 1077 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TAS1R3Q7RTX0 852 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ZBTB8OSQ8IWT0 167 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 FBXO16Q8IX29 292 aaPredicted RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 LINC01465Q8N7H1 131 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 FBXL13Q8NEE6 735 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 SLC30A5Q8TAD4 765 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 NPLOC4Q8TAT6 608 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ASAP3Q8TDY4 903 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 DHX38Q92620 1227 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 FAXDC2Q96IV6 333 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 WDR24Q96S15 920 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 C16orf70Q9BSU1 422 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 MRPL4Q9BYD3 311 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 IFIH1Q9BYX4 1025 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 TMEM117Q9H0C3 514 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 INTS2Q9H0H0 1204 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 CCDC113Q9H0I3 377 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 IKZF4Q9H2S9 585 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 DEF6Q9H4E7 631 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 PCIF1Q9H4Z3 704 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 LZTFL1Q9NQ48 299 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 GCNT4Q9P109 453 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 DNAJC12Q9UKB3 198 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 AGO2Q9UKV8 859 aaKnown RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF215Q9UL58 517 aaPredicted RBP5.85□□□□□ -1.47
COL17A1-206ENST00000483876 WDR81Q562E7 1941 aa5.85□□□□□ -1.47
COL17A1-206ENST00000483876 ASPMQ8IZT6 3477 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 UQCRHLA0A096LP55 91 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 LRRIQ4A6NIV6 560 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 F8VZ95 297 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 H3BRB1 525 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TLR3O15455 904 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CLDN3O15551 220 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 KPNA6O60684 536 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 C22orf31O95567 290 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PGK1P00558 417 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PDGFBP01127 241 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 LGALS2P05162 132 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 UQCRHP07919 91 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PLEKP08567 350 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 RARBP10826 455 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ACTN1P12814 892 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 INSRRP14616 1297 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 SMPD1P17405 629 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PROZP22891 400 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 KLRC1P26715 233 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 GCLMP48507 274 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 MXI1P50539 228 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ACLYP53396 1101 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 MFAP3P55082 362 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CCL23P55773 120 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PTENP60484 403 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 DLG4P78352 724 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 MYL7Q01449 175 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CYP27A1Q02318 531 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 GCNT1Q02742 428 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PTK2Q05397 1052 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms