RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
PTPN18-212ENST00000483617 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
PTPN18-212ENST00000483617 TMEM117Q9H0C3 514 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 RNF19AQ9NV58 838 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 ITIH6Q6UXX5 1313 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
PTPN18-212ENST00000483617 OGTO15294 1046 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 TEX33O43247 280 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 TBX10O75333 385 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 LAG3P18627 525 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
PTPN18-212ENST00000483617 AXLP30530 894 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN18-212ENST00000483617 LTBRP36941 435 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CASP4P49662 377 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 VAMP7P51809 220 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 UBE3AQ05086 875 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 BFSP1Q12934 665 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 SURF1Q15526 300 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CNGA4Q8IV77 575 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CASD1Q96PB1 797 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 ERGIC2Q96RQ1 377 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CWH43Q9H720 699 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
PTPN18-212ENST00000483617 A0A0B4J269 797 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 A0A0U1RQF3 1178 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 LINC01565O15544 149 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
PTPN18-212ENST00000483617 FGF18O76093 207 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 HARSP12081 509 aaKnown RBP12.31□□□□□ -0.44
PTPN18-212ENST00000483617 ATF7P17544 494 aaPredicted RBP12.31□□□□□ -0.44
PTPN18-212ENST00000483617 ADSSP30520 456 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GTF2H1P32780 548 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 DLX2Q07687 328 aaPredicted RBP12.31□□□□□ -0.44
PTPN18-212ENST00000483617 SYCP1Q15431 976 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GBP6Q6ZN66 633 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GJD3Q8N144 294 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 SAAL1Q96ER3 474 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 FBXL18Q96ME1 805 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 C1QTNF1Q9BXJ1 281 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 IGFLR1Q9H665 355 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 MMRN2Q9H8L6 949 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 CD320Q9NPF0 282 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 TLR9Q9NR96 1032 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 CHST12Q9NRB3 414 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 TNFSF13BQ9Y275 285 aa12.31□□□□□ -0.44
PTPN18-212ENST00000483617 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
PTPN18-212ENST00000483617 TISP43B9A030 160 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
PTPN18-212ENST00000483617 P4HA2O15460 535 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 EOMESO95936 686 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 MCF2P10911 925 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 NDUFV1P49821 464 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 AP3M2P53677 418 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 MYL7Q01449 175 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 MCL1Q07820 350 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 CYP24A1Q07973 514 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
PTPN18-212ENST00000483617 CLUL1Q15846 466 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 SLC39A4Q6P5W5 647 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 EFHBQ8N7U6 833 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 SLC35C1Q96A29 364 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 MFSD14AQ96MC6 490 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 TRAIPQ9BWF2 469 aa12.3□□□□□ -0.44
PTPN18-212ENST00000483617 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
PTPN18-212ENST00000483617 NUCKS1Q9H1E3 243 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms