RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 JADE1Q6IE81 842 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 KIAA1841Q6NSI8 718 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 EFHBQ8N7U6 833 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 XXYLT1Q8NBI6 393 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
RPP40-206ENST00000483546 HLA-CQ95604 372 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 SAAL1Q96ER3 474 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 EMILIN2Q9BXX0 1053 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 KCTD10Q9H3F6 313 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 PCIF1Q9H4Z3 704 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 THEGQ9P2T0 379 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 TRAF3IP3Q9Y228 551 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 BRWD1Q9NSI6 2320 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 COL6A3P12111 3177 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.92■□□□□ 0.3
RPP40-206ENST00000483546 CALUO43852 315 aaPredicted RBP16.92■□□□□ 0.3
RPP40-206ENST00000483546 C1RP00736 705 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 AAK1Q2M2I8 961 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 CTC1Q2NKJ3 1217 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.92■□□□□ 0.3
RPP40-206ENST00000483546 ADGRD2Q7Z7M1 963 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 C18orf25Q96B23 403 aaPredicted RBP16.92■□□□□ 0.3
RPP40-206ENST00000483546 GPR62Q9BZJ7 368 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 GOLGA2P5Q9HBQ8 144 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 VWA8A3KMH1 1905 aa16.92■□□□□ 0.3
RPP40-206ENST00000483546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.91■□□□□ 0.3
RPP40-206ENST00000483546 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 HIDE1A8MVS5 230 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 F8W810 466 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 SYN3O14994 580 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 LILRB3O75022 631 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 CSPG5O95196 566 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 NFICP08651 508 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 NRIP1P48552 1158 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 SNRNP35Q16560 246 aaKnown RBP16.91■□□□□ 0.3
RPP40-206ENST00000483546 KIAA0319Q5VV43 1072 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 ATXN2LQ8WWM7 1075 aaKnown RBP16.91■□□□□ 0.3
RPP40-206ENST00000483546 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 UBE2ZQ9H832 354 aaPredicted RBP16.91■□□□□ 0.3
RPP40-206ENST00000483546 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
RPP40-206ENST00000483546 ARHGEF37A1IGU5 675 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 CLIC2O15247 247 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 EXOC3O60645 756 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 ADH1AP07327 375 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 FGFR3P22607 806 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
RPP40-206ENST00000483546 CA8P35219 290 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 CYP2J2P51589 502 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 SPAG1Q07617 926 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 ADAM15Q13444 863 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 STIM1Q13586 685 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 TMEM184AQ6ZMB5 413 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 CBWD2Q8IUF1 395 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 C3orf58Q8NDZ4 430 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 HASPINQ8TF76 798 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 NOC3LQ8WTT2 800 aaKnown RBP16.9■□□□□ 0.3
RPP40-206ENST00000483546 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 DPP3Q9NY33 737 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 CLDND1Q9NY35 253 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 FNIP2Q9P278 1114 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
RPP40-206ENST00000483546 ANO9A1A5B4 782 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 MAPK13O15264 365 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 NR3C1P04150 777 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 MCM4P33991 863 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 PNPLA4P41247 253 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 AARSP49588 968 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPP40-206ENST00000483546 PSMD6Q15008 389 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 EDRF1Q3B7T1 1238 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 CD300LGQ6UXG3 332 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 USP37Q86T82 979 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 RBM23Q86U06 439 aaKnown RBP16.89■□□□□ 0.29
RPP40-206ENST00000483546 WDR49Q8IV35 697 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 EFCAB13Q8IY85 973 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 ZSWIM2Q8NEG5 633 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 CASP10Q92851 521 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 SUSD3Q96L08 255 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 DPP7Q9UHL4 492 aa16.89■□□□□ 0.29
RPP40-206ENST00000483546 MTCL1Q9Y4B5 1905 aaKnown RBP16.88■□□□□ 0.29
RPP40-206ENST00000483546 SCN1AP35498 2009 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 PIRO00625 290 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 CLASP2O75122 1294 aaKnown RBP16.88■□□□□ 0.29
RPP40-206ENST00000483546 TFAMQ00059 246 aaKnown RBP16.88■□□□□ 0.29
RPP40-206ENST00000483546 ENPEPQ07075 957 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 CYP24A1Q07973 514 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 KCNC3Q14003 757 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 PUS10Q3MIT2 529 aaKnown RBP16.88■□□□□ 0.29
RPP40-206ENST00000483546 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
RPP40-206ENST00000483546 C9orf57Q5W0N0 161 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms