RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 DNAAF5Q86Y56 855 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 PALB2Q86YC2 1186 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 C16orf70Q9BSU1 422 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 SLITRK6Q9H5Y7 841 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 TMEM59LQ9UK28 342 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
SND1-210ENST00000483503 ALG6Q9Y672 507 aa12.77□□□□□ -0.37
SND1-210ENST00000483503 KRIT1O00522 736 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 SMPD1P17405 629 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 ACO1P21399 889 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 GNA15P30679 374 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 NSFP46459 744 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 EPHB4P54760 987 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 PAK2Q13177 524 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 NNTQ13423 1086 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
SND1-210ENST00000483503 GRIK4Q16099 956 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 MORN1Q5T089 497 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 KRT12Q99456 494 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 PTPN18Q99952 460 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 NUP85Q9BW27 656 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 CDT1Q9H211 546 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 APOBEC3GQ9HC16 384 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 CNOT8Q9UFF9 292 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 NOC2LQ9Y3T9 749 aaKnown RBP12.76□□□□□ -0.37
SND1-210ENST00000483503 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
SND1-210ENST00000483503 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 SASH3O75995 380 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 CYP1A1P04798 512 aaPredicted RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 UNGP13051 313 aaPredicted RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 CTNNA2P26232 953 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 TNFSF9P41273 254 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 WNT7BP56706 349 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 TFAMQ00059 246 aaKnown RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 CENPCQ03188 943 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 CASP8Q14790 479 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 HSP90B2PQ58FF3 399 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 NT5DC4Q86YG4 428 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 CD302Q8IX05 232 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 THNSL1Q8IYQ7 743 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 NLRP7Q8WX94 980 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 SCLT1Q96NL6 688 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 ADPGKQ9BRR6 497 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 ASB7Q9H672 318 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 MRPL47Q9HD33 250 aaKnown RBP12.75□□□□□ -0.37
SND1-210ENST00000483503 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 COG5Q9UP83 839 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 SCINQ9Y6U3 715 aa12.75□□□□□ -0.37
SND1-210ENST00000483503 A0A087WZ62 844 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.74□□□□□ -0.37
SND1-210ENST00000483503 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 THAP12O43422 761 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 SPOPO43791 374 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 ERLIN2O94905 339 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 HEXIM1O94992 359 aaKnown RBP12.74□□□□□ -0.37
SND1-210ENST00000483503 P4HA1P13674 534 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 ATICP31939 592 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 SLC1A1P43005 524 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
SND1-210ENST00000483503 ZNF132P52740 706 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
SND1-210ENST00000483503 MESDQ14696 234 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
SND1-210ENST00000483503 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 DCAF4L1Q3SXM0 396 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 SEZ6Q53EL9 994 aa12.74□□□□□ -0.37
SND1-210ENST00000483503 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms