RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 DSG1Q02413 1049 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 PNOCQ13519 176 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 TMEM132DQ14C87 1099 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 BMT2Q1RMZ1 405 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 LEXMQ3ZCV2 418 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 TJAP1Q5JTD0 557 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 RTP2Q5QGT7 225 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 KIAA0319Q5VV43 1072 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 CD300LGQ6UXG3 332 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 CEP57Q86XR8 500 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 ENGASEQ8NFI3 743 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
SSR1-208ENST00000483409 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
SSR1-208ENST00000483409 CCDC34Q96HJ3 373 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 EMILIN2Q9BXX0 1053 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 CHST7Q9NS84 486 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 UBQLN1Q9UMX0 589 aaKnown RBP14.55□□□□□ -0.08
SSR1-208ENST00000483409 A0A0C4DFX4 3053 aa14.55□□□□□ -0.08
SSR1-208ENST00000483409 VCANP13611 3396 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 CLIC2O15247 247 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 TGFB1I1O43294 461 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 XPOTO43592 962 aaKnown RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 EXTL3O43909 919 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 RPL9P32969 192 aaKnown RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 WNT7BP56706 349 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 ELAVL2Q12926 359 aaKnown RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 PSMD2Q13200 908 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 KCNC3Q14003 757 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 ZBTB6Q15916 424 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 KANK3Q6NY19 840 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 PRSS55Q6UWB4 352 aaPredicted RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 HS2ST1Q7LGA3 356 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 BRSK2Q8IWQ3 736 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 CD302Q8IX05 232 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 GPD1LQ8N335 351 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 KLHL5Q96PQ7 755 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 TTPALQ9BTX7 342 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 AGPAT3Q9NRZ7 376 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 RBAKQ9NYW8 714 aaPredicted RBP14.54□□□□□ -0.08
SSR1-208ENST00000483409 HSPBP1Q9NZL4 362 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 CLEC1BQ9P126 229 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 SSX2IPQ9Y2D8 614 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 NUB1Q9Y5A7 615 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 HCFC2Q9Y5Z7 792 aa14.54□□□□□ -0.08
SSR1-208ENST00000483409 C5orf42Q9H799 3197 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 C2orf16Q68DN1 1984 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 TEX28O15482 410 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 IL18RAPO95256 599 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 LDHAP00338 332 aaKnown RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 EPCAMP16422 314 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 RPL17P18621 184 aaKnown RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 KLRC2P26717 231 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 TKTP29401 623 aaKnown RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 MCM4P33991 863 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 CYP2J2P51589 502 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 KNOP1Q1ED39 458 aaKnown RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 PTCRAQ6ISU1 281 aaPredicted RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 EFCAB13Q8IY85 973 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 BEST2Q8NFU1 509 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 ERCC4Q92889 916 aaPredicted RBP14.53□□□□□ -0.08
SSR1-208ENST00000483409 MSLNLQ96KJ4 702 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 ASB7Q9H672 318 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 CD207Q9UJ71 328 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 DERAQ9Y315 318 aa14.53□□□□□ -0.08
SSR1-208ENST00000483409 TSC2P49815 1807 aa14.52□□□□□ -0.08
SSR1-208ENST00000483409 PPEF2O14830 753 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 KIAA0391O15091 583 aaKnown RBP14.52□□□□□ -0.09
SSR1-208ENST00000483409 TRAPPC3O43617 180 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 KINO60870 393 aaKnown RBP14.52□□□□□ -0.09
SSR1-208ENST00000483409 ADH1AP07327 375 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 BMP1P13497 986 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 IL9P15248 144 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 CYP3A5P20815 502 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 FGFR3P22607 806 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 LRPAP1P30533 357 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 POU5F1Q01860 360 aaKnown RBP14.52□□□□□ -0.09
SSR1-208ENST00000483409 PSMD5Q16401 504 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 TMEM184AQ6ZMB5 413 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 CBWD2Q8IUF1 395 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 SLC22A17Q8WUG5 538 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 CASP10Q92851 521 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 FAM84AQ96KN4 292 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.09
SSR1-208ENST00000483409 TSPAN18Q96SJ8 248 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 APOL5Q9BWW9 433 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.52□□□□□ -0.09
SSR1-208ENST00000483409 C2CD2Q9Y426 696 aa14.52□□□□□ -0.09
SSR1-208ENST00000483409 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.52□□□□□ -0.09
SSR1-208ENST00000483409 CLCN4P51793 760 aa14.51□□□□□ -0.09
SSR1-208ENST00000483409 SNRPFP62306 86 aaKnown RBP14.51□□□□□ -0.09
SSR1-208ENST00000483409 TFAMQ00059 246 aaKnown RBP14.51□□□□□ -0.09
SSR1-208ENST00000483409 CREMQ03060 361 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms