RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 PRAMEF4O60810 478 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 PROP1O75360 226 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 ASMTLO95671 621 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 ZNF81P51508 661 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 SCAPQ12770 1279 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 NFE2L2Q16236 605 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 AGAP9Q5VTM2 703 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 METRNLQ641Q3 311 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 PDZD4Q76G19 769 aaPredicted RBP4.78□□□□□ -1.64
RPA3-207ENST00000483031 C1QL2Q7Z5L3 287 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 SLC41A1Q8IVJ1 513 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 C9orf106Q8NAJ2 232 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 NEU1Q99519 415 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 C1QTNF7Q9BXJ2 289 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 IFT57Q9NWB7 429 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 LRIT1Q9P2V4 623 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 MSRAQ9UJ68 235 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 EID1Q9Y6B2 187 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 TIAM1Q13009 1591 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 SAMD9LQ8IVG5 1584 aa4.78□□□□□ -1.64
RPA3-207ENST00000483031 WASHC2CQ9Y4E1 1318 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 NKTRP30414 1462 aaKnown RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 PRXQ9BXM0 1461 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 PRSS38A1L453 326 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 LCHNA4D1U4 455 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 LRRC3CA6NJW4 275 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 ITGA10O75578 1167 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 CHN2P52757 468 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 MRPS35P82673 323 aaKnown RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 MEF2AQ02078 507 aaPredicted RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 PPARAQ07869 468 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 BMS1Q14692 1282 aaKnown RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 C19orf54Q5BKX5 351 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 GPR158Q5T848 1215 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 MAPKAPK5Q8IW41 473 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 ZNF366Q8N895 744 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 OR56A1Q8NGH5 318 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 MDM1Q8TC05 714 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 LRRC59Q96AG4 307 aaKnown RBP4.77□□□□□ -1.65
RPA3-207ENST00000483031 ALOXE3Q9BYJ1 711 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 TBCCD1Q9NVR7 557 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 SLC17A6Q9P2U8 582 aa4.77□□□□□ -1.65
RPA3-207ENST00000483031 UTRNP46939 3433 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 GAS7O60861 476 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 CLIP1P30622 1438 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 PHC1P78364 1004 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 TROQ12816 1431 aaPredicted RBP4.76□□□□□ -1.65
RPA3-207ENST00000483031 DIP2AQ14689 1571 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 SF3A1Q15459 793 aaKnown RBP4.76□□□□□ -1.65
RPA3-207ENST00000483031 RHOT2Q8IXI1 618 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 TMEM132CQ8N3T6 1108 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 ACTRT2Q8TDY3 377 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 PHACTR3Q96KR7 559 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 SETD5Q9C0A6 1442 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 KLK15Q9H2R5 256 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 MS4A5Q9H3V2 200 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 CASS4Q9NQ75 786 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 THG1LQ9NWX6 298 aaKnown RBP4.76□□□□□ -1.65
RPA3-207ENST00000483031 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
RPA3-207ENST00000483031 ARHGAP23Q9P227 1491 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 CDC42BPBQ9Y5S2 1711 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 ATRNO75882 1429 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 NCOA3Q9Y6Q9 1424 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 DRGXA6NNA5 263 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 KPNA6O60684 536 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 ZFPL1O95159 310 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 GASTP01350 101 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 ATXN7L2Q5T6C5 722 aaPredicted RBP4.75□□□□□ -1.65
RPA3-207ENST00000483031 SH2D3CQ8N5H7 860 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
RPA3-207ENST00000483031 ZNF610Q8N9Z0 462 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 SMC1BQ8NDV3 1235 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 SNX33Q8WV41 574 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 RSAD2Q8WXG1 361 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 FUBP1Q96AE4 644 aaKnown RBP4.75□□□□□ -1.65
RPA3-207ENST00000483031 CEP95Q96GE4 821 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 ZNF778Q96MU6 729 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 HEPHQ9BQS7 1158 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 PRDM12Q9H4Q4 367 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 KLHL11Q9NVR0 708 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 GPRC5DQ9NZD1 345 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 NUMBLQ9Y6R0 609 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 SLIT1O75093 1534 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 NCOA2Q15596 1464 aa4.75□□□□□ -1.65
RPA3-207ENST00000483031 PJA2O43164 708 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 ELANEP08246 267 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 ATF3P18847 181 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 FLT3LGP49771 235 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 PCBP1Q15365 356 aaKnown RBP eCLIP4.74□□□□□ -1.65
RPA3-207ENST00000483031 TERF2Q15554 542 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 B3GNTL1Q67FW5 361 aaPredicted RBP4.74□□□□□ -1.65
RPA3-207ENST00000483031 LRRTM3Q86VH5 581 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 SYNPOQ8N3V7 929 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 RNF31Q96EP0 1072 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 PDLIM2Q96JY6 352 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 REXO4Q9GZR2 422 aaKnown RBP4.74□□□□□ -1.65
RPA3-207ENST00000483031 WNT8AQ9H1J5 351 aa4.74□□□□□ -1.65
RPA3-207ENST00000483031 EVLQ9UI08 416 aaPredicted RBP4.74□□□□□ -1.65
RPA3-207ENST00000483031 PRSS50Q9UI38 385 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms