RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 NECAB1Q8N987 351 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 C3orf58Q8NDZ4 430 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF461Q8TAF7 563 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 DEPTORQ8TB45 409 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 WASF1Q92558 559 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ELSPBP1Q96BH3 223 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 TCEAL4Q96EI5 215 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 PPP1R10Q96QC0 940 aaKnown RBP8.13□□□□□ -1.11
CSDE1-206ENST00000483030 NACC1Q96RE7 527 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 CORO1BQ9BR76 489 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 TMEM60Q9H2L4 133 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 BRD9Q9H8M2 597 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 GOLGA2P5Q9HBQ8 144 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ZFP14Q9HCL3 533 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 AVENQ9NQS1 362 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-206ENST00000483030 COL4A3Q01955 1670 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 SMIM28A0A1B0GU29 152 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ARHGEF37A1IGU5 675 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ARHGEF35A5YM69 484 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 PRRG1O14668 218 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ABLIM3O94929 683 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 FCARP24071 287 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 MCM7P33993 719 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ROR1Q01973 937 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 LPAL2Q16609 132 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 DCAF4L1Q3SXM0 396 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 FAM78AQ5JUQ0 283 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 PRSS36Q5K4E3 855 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 NT5DC1Q5TFE4 455 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ATF7IP2Q5U623 682 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 SLC8B1Q6J4K2 584 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 ZSWIM3Q96MP5 696 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 UROC1Q96N76 676 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 KIFC3Q9BVG8 833 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 TRMT61BQ9BVS5 477 aaKnown RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 FAM126AQ9BYI3 521 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 LMAN1LQ9HAT1 526 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 CYP4F11Q9HBI6 524 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 TUFT1Q9NNX1 390 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 PARD6AQ9NPB6 346 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 PRMT8Q9NR22 394 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-206ENST00000483030 GMEB2Q9UKD1 530 aa8.12□□□□□ -1.11
CSDE1-206ENST00000483030 WDR27A2RRH5 827 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 K7ERI5 159 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF197O14709 1029 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 SEC24AO95486 1093 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 TDGF1P13385 188 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 ATF2P15336 505 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 RPA1P27694 616 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 GDI1P31150 447 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 CCR2P41597 374 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 NAMPTP43490 491 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 EFNA5P52803 228 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 NRLP54845 237 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 OSTNP61366 133 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-206ENST00000483030 PDE4CQ08493 712 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 PPP2R5AQ15172 486 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 CYP4A22Q5TCH4 519 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 MAMSTRQ6ZN01 415 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 TCEAL8Q8IYN2 117 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
CSDE1-206ENST00000483030 CEP120Q8N960 986 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 FAM3CQ92520 227 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 DNASE1L2Q92874 299 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 IRF7Q92985 503 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 IFT74Q96LB3 600 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 ASB16Q96NS5 453 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 POLR3CQ9BUI4 534 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-206ENST00000483030 CHRDQ9H2X0 955 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF334Q9HCZ1 680 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-206ENST00000483030 RAB23Q9ULC3 237 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 SPTBN2O15020 2390 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 FRYLO94915 3013 aa8.11□□□□□ -1.11
CSDE1-206ENST00000483030 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 TPRP12270 2363 aaKnown RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 CCDC169A6NNP5 214 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 H7C4K7 107 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PODXLO00592 558 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 MICAL2O94851 1124 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 GJA1P17302 382 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PSMC3P17980 439 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 VIPR2P41587 438 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 CXCL12P48061 93 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 YARSP54577 528 aaKnown RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 TRIM29Q14134 588 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms