RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 C3orf58Q8NDZ4 430 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 DNASE1L2Q92874 299 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 DDX27Q96GQ7 796 aaKnown RBP14.1□□□□□ -0.15
TMEM54-206ENST00000482771 UROC1Q96N76 676 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
TMEM54-206ENST00000482771 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
TMEM54-206ENST00000482771 CYP4F11Q9HBI6 524 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 PRMT8Q9NR22 394 aaPredicted RBP14.1□□□□□ -0.15
TMEM54-206ENST00000482771 GMEB2Q9UKD1 530 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 RAB23Q9ULC3 237 aa14.1□□□□□ -0.15
TMEM54-206ENST00000482771 CNOT1A5YKK6 2376 aaKnown RBP14.09□□□□□ -0.15
TMEM54-206ENST00000482771 SDK1Q7Z5N4 2213 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ARHGEF35A5YM69 484 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ZNF197O14709 1029 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 SEC24AO95486 1093 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 FCARP24071 287 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 MCM7P33993 719 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 NRLP54845 237 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ROR1Q01973 937 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 SPEM2Q0P670 501 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 PRSS36Q5K4E3 855 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ATF7IP2Q5U623 682 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 SLC8B1Q6J4K2 584 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 MAMSTRQ6ZN01 415 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
TMEM54-206ENST00000482771 CELF5Q8N6W0 485 aaKnown RBP14.09□□□□□ -0.15
TMEM54-206ENST00000482771 FAM3CQ92520 227 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ZSWIM3Q96MP5 696 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 KIFC3Q9BVG8 833 aa14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ZNF334Q9HCZ1 680 aaPredicted RBP14.09□□□□□ -0.15
TMEM54-206ENST00000482771 ARID2Q68CP9 1835 aa14.08□□□□□ -0.15
TMEM54-206ENST00000482771 VWA8A3KMH1 1905 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 WDR27A2RRH5 827 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 K7ERI5 159 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 ATF2P15336 505 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 GDI1P31150 447 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 VIPR2P41587 438 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 CCR2P41597 374 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 EFNA5P52803 228 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 OSTNP61366 133 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
TMEM54-206ENST00000482771 PPP2R5AQ15172 486 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 CYP4A22Q5TCH4 519 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 ALKAL1Q6UXT8 129 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 PDZD4Q76G19 769 aaPredicted RBP14.08□□□□□ -0.16
TMEM54-206ENST00000482771 TCEAL8Q8IYN2 117 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 IRF7Q92985 503 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 CHRDQ9H2X0 955 aa14.08□□□□□ -0.16
TMEM54-206ENST00000482771 MAP1BP46821 2468 aaKnown RBP14.08□□□□□ -0.16
TMEM54-206ENST00000482771 MICAL2O94851 1124 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 TDGF1P13385 188 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 PSMC3P17980 439 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 RPA1P27694 616 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 CXCL12P48061 93 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 YARSP54577 528 aaKnown RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 PPP2R5DQ14738 602 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 ZNF174Q15697 407 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 PRR23BQ6ZRT6 265 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 APBB1IPQ7Z5R6 666 aaPredicted RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 MAP4K3Q8IVH8 894 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 SMARCD2Q92925 531 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 ZNF512Q96ME7 567 aaPredicted RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 ASB16Q96NS5 453 aa14.07□□□□□ -0.16
TMEM54-206ENST00000482771 CCDC94Q9BW85 323 aaPredicted RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 KMT2BQ9UMN6 2715 aaPredicted RBP14.07□□□□□ -0.16
TMEM54-206ENST00000482771 H7C4K7 107 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 PODXLO00592 558 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
TMEM54-206ENST00000482771 RETP07949 1114 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 MYL4P12829 197 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 GJA1P17302 382 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 CCR3P51677 355 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 TRIM29Q14134 588 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 MRPL58Q14197 206 aaKnown RBP14.06□□□□□ -0.16
TMEM54-206ENST00000482771 ANKRD1Q15327 319 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 ME3Q16798 604 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 CTXN3Q4LDR2 81 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 XKR4Q5GH76 650 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 LAIR1Q6GTX8 287 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 VITQ6UXI7 678 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 ELMOD1Q8N336 334 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 CEP120Q8N960 986 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 ERMNQ8TAM6 284 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
TMEM54-206ENST00000482771 TRPV5Q9NQA5 729 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 SLC38A7Q9NVC3 462 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 CEP72Q9P209 647 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
TMEM54-206ENST00000482771 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 INSL5Q9Y5Q6 135 aa14.06□□□□□ -0.16
TMEM54-206ENST00000482771 PIAS3Q9Y6X2 628 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms