RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PLAGL2Q9UPG8 496 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCM2-215ENST00000482714 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 GRXCR1A8MXD5 290 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 PIRO00625 290 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 N4BP1O75113 896 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 NFICP08651 508 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 ZNF18P17022 549 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 PPM1AP35813 382 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 BMPR1AP36894 532 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 PNPLA4P41247 253 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 RABGGTBP53611 331 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 RBP5P82980 135 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 CETN1Q12798 172 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 UPP1Q16831 310 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 PAN2Q504Q3 1202 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 C15orf39Q6ZRI6 1047 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 ZNF558Q96NG5 402 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 MRPL42Q9Y6G3 142 aaKnown RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 FNDC1Q4ZHG4 1894 aaPredicted RBP16.57■□□□□ 0.24
CCM2-215ENST00000482714 SZT2Q5T011 3432 aa16.57■□□□□ 0.24
CCM2-215ENST00000482714 TRIP11Q15643 1979 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 LINC01553A4QN01 128 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 C5orf67F2Z3F1 127 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 NRP1O14786 923 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 TPM2P07951 284 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 ATICP31939 592 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 WNT7BP56706 349 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 BCAR1P56945 870 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 DLG4P78352 724 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 KCNJ12Q14500 433 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 C1orf220Q5T0J3 134 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 FAM109BQ6ICB4 259 aaPredicted RBP16.56■□□□□ 0.24
CCM2-215ENST00000482714 KCNT2Q6UVM3 1135 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 FAXDC2Q96IV6 333 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 TUBGCP2Q9BSJ2 902 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 LIMA1Q9UHB6 759 aaKnown RBP16.56■□□□□ 0.24
CCM2-215ENST00000482714 COQ4Q9Y3A0 265 aa16.56■□□□□ 0.24
CCM2-215ENST00000482714 TMEM265A0A087WTH1 108 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 STAU1O95793 577 aaKnown RBP16.55■□□□□ 0.24
CCM2-215ENST00000482714 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCM2-215ENST00000482714 ERVK-21P61565 698 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 PLCB3Q01970 1234 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 C9orf57Q5W0N0 161 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 C1orf127Q8N9H9 656 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 TAF4BQ92750 862 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 C18orf25Q96B23 403 aaPredicted RBP16.55■□□□□ 0.24
CCM2-215ENST00000482714 TGS1Q96RS0 853 aaKnown RBP16.55■□□□□ 0.24
CCM2-215ENST00000482714 HSD3B7Q9H2F3 369 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 SPG21Q9NZD8 308 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 PTPRSQ13332 1948 aa16.55■□□□□ 0.24
CCM2-215ENST00000482714 ARHGEF37A1IGU5 675 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 GTPBP10A4D1E9 387 aaKnown RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCM2-215ENST00000482714 PHACTR2O75167 634 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 B3GAT3O94766 335 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 CA3P07451 260 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 LINC00271P0C7V0 271 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 OR1G1P47890 313 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 CLCNKBP51801 687 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 KRT17Q04695 432 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 SOX4Q06945 474 aaPredicted RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 ELAVL2Q12926 359 aaKnown RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 TRPC3Q13507 836 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 SGSM1Q2NKQ1 1148 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 VWA3BQ502W6 1294 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 COLGALT1Q8NBJ5 622 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 CXorf38Q8TB03 319 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 TIFAQ96CG3 184 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 VRTNQ9H8Y1 702 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 LCHNA4D1U4 455 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 PODXLO00592 558 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 TADA2AO75478 443 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 SLC34A2O95436 690 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 GCLMP48507 274 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms