RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 BEST2Q8NFU1 509 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 SPATA20Q8TB22 786 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 AUTS2Q8WXX7 1259 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 PABPC5Q96DU9 382 aaKnown RBP22.69■■□□□ 1.22
SEC13-217ENST00000482647 CHST7Q9NS84 486 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 PDXKO00764 312 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 NFICP08651 508 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 LRPAP1P30533 357 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 GTF2F1P35269 517 aaKnown RBP eCLIP22.68■■□□□ 1.22
SEC13-217ENST00000482647 CYP2J2P51589 502 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 DSG1Q02413 1049 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 PTPN14Q15678 1187 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 DUSP6Q16828 381 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 KIAA0319Q5VV43 1072 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 SPATA1Q5VX52 437 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 NT5DC4Q86YG4 428 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 GUF1Q8N442 669 aaKnown RBP22.68■■□□□ 1.22
SEC13-217ENST00000482647 EFHBQ8N7U6 833 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 FBXL18Q96ME1 805 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 KCTD10Q9H3F6 313 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 PRDM6Q9NQX0 595 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 THEGQ9P2T0 379 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 TDRD15B5MCY1 1934 aaKnown RBP22.68■■□□□ 1.22
SEC13-217ENST00000482647 PLXNA4Q9HCM2 1894 aa22.68■■□□□ 1.22
SEC13-217ENST00000482647 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.67■■□□□ 1.22
SEC13-217ENST00000482647 C2CD2LO14523 706 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 CTC1Q2NKJ3 1217 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 ZNF658Q5TYW1 1059 aaPredicted RBP22.67■■□□□ 1.22
SEC13-217ENST00000482647 FAM171A1Q5VUB5 890 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 CD300LGQ6UXG3 332 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 EP400NLQ6ZTU2 488 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 CBWD2Q8IUF1 395 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 GPR65Q8IYL9 337 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 TMEM174Q8WUU8 243 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 ERCC4Q92889 916 aaPredicted RBP22.67■■□□□ 1.22
SEC13-217ENST00000482647 CLDND1Q9NY35 253 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 NUB1Q9Y5A7 615 aa22.67■■□□□ 1.22
SEC13-217ENST00000482647 CALUO43852 315 aaPredicted RBP22.66■■□□□ 1.22
SEC13-217ENST00000482647 EXOC3O60645 756 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 LILRB3O75022 631 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 IGFBP6P24592 240 aaPredicted RBP22.66■■□□□ 1.22
SEC13-217ENST00000482647 ADAM15Q13444 863 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 SURF1Q15526 300 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 SNRNP35Q16560 246 aaKnown RBP22.66■■□□□ 1.22
SEC13-217ENST00000482647 C3orf58Q8NDZ4 430 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 CACTINQ8WUQ7 758 aaKnown RBP22.66■■□□□ 1.22
SEC13-217ENST00000482647 B3GALT6Q96L58 329 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 TTPALQ9BTX7 342 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 UBE2ZQ9H832 354 aaPredicted RBP22.66■■□□□ 1.22
SEC13-217ENST00000482647 A0A0C4DFX4 3053 aa22.66■■□□□ 1.22
SEC13-217ENST00000482647 UNC80Q8N2C7 3258 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 GOLGA6L22H0YM25 854 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 CLASP2O75122 1294 aaKnown RBP22.65■■□□□ 1.22
SEC13-217ENST00000482647 CREMQ03060 361 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 MYBPC2Q14324 1141 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 AAK1Q2M2I8 961 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.65■■□□□ 1.22
SEC13-217ENST00000482647 CEP57Q86XR8 500 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 SLC9A9Q8IVB4 645 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.65■■□□□ 1.22
SEC13-217ENST00000482647 RDH13Q8NBN7 331 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 ATXN2LQ8WWM7 1075 aaKnown RBP22.65■■□□□ 1.22
SEC13-217ENST00000482647 RIN2Q8WYP3 895 aaPredicted RBP22.65■■□□□ 1.22
SEC13-217ENST00000482647 PDE11AQ9HCR9 933 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.65■■□□□ 1.22
SEC13-217ENST00000482647 DPP3Q9NY33 737 aa22.65■■□□□ 1.22
SEC13-217ENST00000482647 NR3C1P04150 777 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 CNPP09543 421 aaKnown RBP22.64■■□□□ 1.21
SEC13-217ENST00000482647 SRGAP2BP0DMP2 458 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 KCNA5P22460 613 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 GUCY2FP51841 1108 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 TFAMQ00059 246 aaKnown RBP22.64■■□□□ 1.21
SEC13-217ENST00000482647 RTP2Q5QGT7 225 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 PDXDC1Q6P996 788 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 PPFIBP1Q86W92 1011 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 KLHL5Q96PQ7 755 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 RXFP1Q9HBX9 757 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 DMAC2Q9NW81 257 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 TRAF3IP3Q9Y228 551 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 CITO14578 2027 aa22.64■■□□□ 1.21
SEC13-217ENST00000482647 SPTBN5Q9NRC6 3674 aaKnown RBP22.63■■□□□ 1.21
SEC13-217ENST00000482647 I3L4J1 428 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 LINC01565O15544 149 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 FGFR3P22607 806 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 PAX3P23760 479 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 KLRC2P26717 231 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 MCM4P33991 863 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 BRCC3P46736 316 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 NDUFV1P49821 464 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 WNT7BP56706 349 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 MRPS5P82675 430 aaKnown RBP22.63■■□□□ 1.21
SEC13-217ENST00000482647 COBLL1Q53SF7 1204 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 C9orf57Q5W0N0 161 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 EFCAB13Q8IY85 973 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 SMYD4Q8IYR2 804 aaPredicted RBP22.63■■□□□ 1.21
SEC13-217ENST00000482647 LMBRD1Q9NUN5 540 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 MAN1B1Q9UKM7 699 aa22.63■■□□□ 1.21
SEC13-217ENST00000482647 PIRO00625 290 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms