RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 VGLL2Q8N8G2 317 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 C12orf50Q8NA57 414 aaPredicted RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 TMEM52Q8NDY8 209 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 HOXB13Q92826 284 aaPredicted RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 GBP4Q96PP9 640 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 C7orf25Q9BPX7 421 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 OSBPL6Q9BZF3 934 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 RNF208Q9H0X6 261 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 RIC8BQ9NVN3 520 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 PIH1D1Q9NWS0 290 aaKnown RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 MTRRQ9UBK8 725 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 GULP1Q9UBP9 304 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 HS3ST4Q9Y661 456 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 AGAP14A8MT82 685 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 M0R082 166 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 NPHS1O60500 1241 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TK1P04183 234 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 ITGA2BP08514 1039 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 SYN1P17600 705 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 MLH1P40692 756 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 SLC6A9P48067 706 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TDO2P48775 406 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TMF1P82094 1093 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TNK2Q07912 1038 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 SMC1AQ14683 1233 aaKnown RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 PRAMEF9Q5VWM5 478 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 NLGN2Q8NFZ4 835 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 KBTBD7Q8WVZ9 684 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 CNDP2Q96KP4 475 aaKnown RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 EIF2AQ9BY44 585 aaKnown RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 OR10A4Q9H209 315 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 TRPV4Q9HBA0 871 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 CCDC177Q9NQR7 707 aaPredicted RBP8.12□□□□□ -1.11
RBM39-233ENST00000482563 DIAPH3Q9NSV4 1193 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 USP18Q9UMW8 372 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 SNX8Q9Y5X2 465 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 PIAS3Q9Y6X2 628 aa8.12□□□□□ -1.11
RBM39-233ENST00000482563 PRAMEF25A6NGN4 478 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 C22orf46C9J442 243 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 PI4K2BG5E9Z4 385 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 FCHO1O14526 889 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 CLGNO14967 610 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 KIAA0355O15063 1070 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 DGKIO75912 1065 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 RAB6AP20340 208 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 TGM1P22735 817 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 CTCFP49711 727 aaPredicted RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 AFF3P51826 1226 aaKnown RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 ACTR2P61160 394 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 CDC42EP1Q00587 391 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 CREB5Q02930 508 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 WTAPQ15007 396 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 VWA3BQ502W6 1294 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 BTBD8Q5XKL5 378 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 ZPBP2Q6X784 338 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 RNF44Q7L0R7 432 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 UBE2Q1Q7Z7E8 422 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 AVL9Q8NBF6 648 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 GOT1L1Q8NHS2 421 aaPredicted RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 PLEKHO2Q8TD55 490 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 RSAD2Q8WXG1 361 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 RNF125Q96EQ8 232 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 PRPF18Q99633 342 aaKnown RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 FOXP3Q9BZS1 431 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 USP44Q9H0E7 712 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 DUSP15Q9H1R2 295 aaPredicted RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 FEZ2Q9UHY8 353 aaPredicted RBP8.11□□□□□ -1.11
RBM39-233ENST00000482563 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
RBM39-233ENST00000482563 NT5C1B-RDH14C9J2C7 533 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 H3BNC9 293 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 SLC27A2O14975 620 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 HMMRO75330 724 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 ACTL6BO94805 426 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 AHSGP02765 367 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 RPLP2P05387 115 aaKnown RBP8.1□□□□□ -1.11
RBM39-233ENST00000482563 MALP21145 153 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 GJA4P35212 333 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 RGS3P49796 1198 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 SLC6A3Q01959 620 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 ZNF783Q6ZMS7 281 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 ZNF384Q8TF68 577 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 CFHR4Q92496 578 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 GPR62Q9BZJ7 368 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 SEMA6CQ9H3T2 930 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 TAF1DQ9H5J8 278 aaPredicted RBP8.1□□□□□ -1.11
RBM39-233ENST00000482563 EPS8L2Q9H6S3 715 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 SARS2Q9NP81 518 aaKnown RBP8.1□□□□□ -1.11
RBM39-233ENST00000482563 INCENPQ9NQS7 918 aa8.1□□□□□ -1.11
RBM39-233ENST00000482563 RBM12Q9NTZ6 932 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms