RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC5A4Q9NY91 659 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 CAPN11Q9UMQ6 739 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 PCDHA1Q9Y5I3 950 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 MYH4Q9Y623 1939 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 F5H6K3 240 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 TEX33O43247 280 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 GYPCP04921 128 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CASP14P31944 242 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CYLC1P35663 651 aaPredicted RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 GNG11P61952 73 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 KLRC3Q07444 240 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 GRB10Q13322 594 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 SIM2Q14190 667 aaPredicted RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 LRRC14Q15048 493 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 QRICH1Q2TAL8 776 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 ARHGAP29Q52LW3 1261 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 IL31Q6EBC2 164 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 LLGL2Q6P1M3 1020 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 ZAR1Q86SH2 424 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 SMYD4Q8IYR2 804 aaPredicted RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 CEP112Q8N8E3 955 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CCDC89Q8N998 374 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 FLCNQ8NFG4 579 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 CHURC1Q8WUH1 139 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 FAM151AQ8WW52 585 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 STAMQ92783 540 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 ERGIC2Q96RQ1 377 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 TUBGCP2Q9BSJ2 902 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 MMTAG2Q9BU76 263 aaKnown RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 KCNMB3Q9NPA1 279 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 PAK6Q9NQU5 681 aaPredicted RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 OBP2AQ9NY56 170 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 LUZP4Q9P127 313 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 PUF60Q9UHX1 559 aaKnown RBP8.44□□□□□ -1.06
SNX13-208ENST00000482558 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
SNX13-208ENST00000482558 DNAJC25-GNG10A0A024R161 153 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 LOC100289279A0A1B0GTE1 492 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 PP2D1A8MPX8 630 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 ADAMTS3O15072 1205 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 PPIP5K2O43314 1243 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 EYA4O95677 639 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CYP11A1P05108 521 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CYP3A4P08684 503 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 FAM153BP0C7A2 387 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 IMPDH2P12268 514 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 CASP1P29466 404 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CDC25AP30304 524 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CIITAP33076 1130 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 KRT9P35527 623 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CCT6AP40227 531 aaKnown RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 MTIF2P46199 727 aaKnown RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 NEK3P51956 506 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 FAM193AP78312 1265 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 ZBED6P86452 979 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 HSP90AA4PQ58FG1 418 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 RNF219Q5W0B1 726 aaPredicted RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 HGSNATQ68CP4 663 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 FAM83AQ86UY5 434 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 FAM160B2Q86V87 743 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 IRF2BP1Q8IU81 584 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 TTLL6Q8N841 843 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 AGBL3Q8NEM8 1001 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 PJA1Q8NG27 643 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 EZH1Q92800 747 aaPredicted RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 CORO1BQ9BR76 489 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 SARGQ9BW04 601 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 YIPF2Q9BWQ6 316 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 ANO3Q9BYT9 981 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 TSGA10Q9BZW7 698 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 MIR1-1HGQ9H1L0 117 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 VPS16Q9H269 839 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 HAUS4Q9H6D7 363 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 NGRNQ9NPE2 291 aaKnown RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 BLOC1S4Q9NUP1 217 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 TAB2Q9NYJ8 693 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 ZNF215Q9UL58 517 aaPredicted RBP8.43□□□□□ -1.06
SNX13-208ENST00000482558 CYP8B1Q9UNU6 501 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
SNX13-208ENST00000482558 CTAGE9A4FU28 777 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 DDTLA6NHG4 134 aaPredicted RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 SLC37A4O43826 429 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 URI1O94763 535 aaPredicted RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 TDP2O95551 362 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 TRIM21P19474 475 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 ARNTP27540 789 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 SREBF1P36956 1147 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 FKBP3Q00688 224 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 DLGAP5Q15398 846 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 MEA1Q16626 185 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 MAN2A1Q16706 1144 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms