RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 MYMKA6NI61 221 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 OGTO15294 1046 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 GCNT3O95395 438 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 YEATS4O95619 227 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 GAP43P17677 238 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 IGFBP6P24592 240 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 RPL9P32969 192 aaKnown RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 SIGLEC14Q08ET2 396 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 PPM1LQ5SGD2 360 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 SUGP1Q8IWZ8 645 aaKnown RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 SLC7A14Q8TBB6 771 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 KCNN1Q92952 543 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 HVCN1Q96D96 273 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 PANK2Q9BZ23 570 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 SEL1LQ9UBV2 794 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.32
COL16A1-212ENST00000482478 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
COL16A1-212ENST00000482478 A0A087X0B3 334 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 TISP43B9A030 160 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 SYN3O14994 580 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ADAM12O43184 909 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 PPP6R2O75170 966 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ZMYND10O75800 440 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 OR1D2P34982 312 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 GTF2BQ00403 316 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 VARS2Q5ST30 1063 aaKnown RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ADALQ6DHV7 355 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 SLC39A4Q6P5W5 647 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 CYP26C1Q6V0L0 522 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ZDHHC14Q8IZN3 488 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 PLCD3Q8N3E9 789 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 ZNF707Q96C28 371 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 PLEKHA5Q9HAU0 1116 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 EXOC7Q9UPT5 735 aa17.07■□□□□ 0.32
COL16A1-212ENST00000482478 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-212ENST00000482478 CCL16O15467 120 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 C1RP00736 705 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
COL16A1-212ENST00000482478 ARPP19P56211 112 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 DHX58Q96C10 678 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 PRKD2Q9BZL6 878 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 LIMD1Q9UGP4 676 aa17.06■□□□□ 0.32
COL16A1-212ENST00000482478 TECTAO75443 2155 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 A0A0B4J269 797 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 TTC26A0AVF1 554 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 LACTBL1A8MY62 500 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 H7C4K7 107 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 FAM189A1O60320 539 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 CUTAO60888 179 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 XYLBO75191 536 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 NFICP08651 508 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 ME1P48163 572 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 GUCY2FP51841 1108 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 ROR1Q01973 937 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 PKP1Q13835 747 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 TMEM132DQ14C87 1099 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 SLFN12LQ6IEE8 588 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 CD300LGQ6UXG3 332 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 UBALD2Q8IYN6 164 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 SYCP3Q8IZU3 236 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
COL16A1-212ENST00000482478 PBXIP1Q96AQ6 731 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 ST6GALNAC4Q9H4F1 302 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 AGO2Q9UKV8 859 aaKnown RBP17.05■□□□□ 0.32
COL16A1-212ENST00000482478 BACE2Q9Y5Z0 518 aa17.05■□□□□ 0.32
COL16A1-212ENST00000482478 ANKRD63C9JTQ0 380 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 PRRG1O14668 218 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 HNRNPA1P09651 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL16A1-212ENST00000482478 CPB1P15086 417 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 ACOT2P49753 483 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 ASIC1P78348 528 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 RAB33AQ14088 237 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 CTXN3Q4LDR2 81 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 AXDND1Q5T1B0 1012 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-212ENST00000482478 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
COL16A1-212ENST00000482478 JADE1Q6IE81 842 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 LILRA6Q6PI73 481 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 CCDC65Q8IXS2 484 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms