RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 HDAC7Q8WUI4 952 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 DDX12PQ92771 950 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 DHX58Q96C10 678 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 NTPCRQ9BSD7 190 aaKnown RBP12.22□□□□□ -0.45
SORT1-204ENST00000482236 CXCL16Q9H2A7 254 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 FAM13BQ9NYF5 915 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
SORT1-204ENST00000482236 TUBGCP4Q9UGJ1 667 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 UBQLN1Q9UMX0 589 aaKnown RBP12.22□□□□□ -0.45
SORT1-204ENST00000482236 USTQ9Y2C2 406 aa12.22□□□□□ -0.45
SORT1-204ENST00000482236 SPTBN5Q9NRC6 3674 aaKnown RBP12.22□□□□□ -0.45
SORT1-204ENST00000482236 TMEM189-UBE2V1I3L0A0 370 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 LILRB3O75022 631 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 ZMYND10O75800 440 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 BRD1O95696 1058 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 ZSCAN22P10073 491 aaPredicted RBP12.21□□□□□ -0.45
SORT1-204ENST00000482236 PROZP22891 400 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 FSHRP23945 695 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 ASIC1P78348 528 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 AMPD3Q01432 767 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.45
SORT1-204ENST00000482236 CMASQ8NFW8 434 aaPredicted RBP12.21□□□□□ -0.45
SORT1-204ENST00000482236 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 HVCN1Q96D96 273 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 ACCSQ96QU6 501 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 PLEKHA5Q9HAU0 1116 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 PTPRHQ9HD43 1115 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 PANK4Q9NVE7 773 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 SEL1LQ9UBV2 794 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
SORT1-204ENST00000482236 ARHGEF37A1IGU5 675 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 SYN3O14994 580 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 F13A1P00488 732 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 HNRNPA1P09651 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
SORT1-204ENST00000482236 FGFR3P22607 806 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 TNFSF9P41273 254 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 ZNF131P52739 623 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 TMEM132DQ14C87 1099 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 ZC2HC1CQ53FD0 456 aaPredicted RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 AXDND1Q5T1B0 1012 aaPredicted RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 MAP4K3Q8IVH8 894 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 CD302Q8IX05 232 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 ZDHHC14Q8IZN3 488 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 ZMAT2Q96NC0 199 aaKnown RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 CYP4F11Q9HBI6 524 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 C11orf16Q9NQ32 467 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 MTRRQ9UBK8 725 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 FBXW11Q9UKB1 542 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
SORT1-204ENST00000482236 PCDHB13Q9Y5F0 798 aa12.2□□□□□ -0.46
SORT1-204ENST00000482236 LACTBL1A8MY62 500 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 CUTAO60888 179 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 YEATS4O95619 227 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 ODC1P11926 461 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 NASPP49321 788 aaPredicted RBP12.19□□□□□ -0.46
SORT1-204ENST00000482236 ACOT2P49753 483 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 ALCAMQ13740 583 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 POSTNQ15063 836 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 NAB2Q15742 525 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 SLC10A6Q3KNW5 377 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 GRASPQ7Z6J2 395 aaPredicted RBP12.19□□□□□ -0.46
SORT1-204ENST00000482236 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 C3orf58Q8NDZ4 430 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 CLSTN3Q9BQT9 956 aa12.19□□□□□ -0.46
SORT1-204ENST00000482236 WDR6Q9NNW5 1121 aaKnown RBP12.19□□□□□ -0.46
SORT1-204ENST00000482236 MYH11P35749 1972 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 MYMKA6NI61 221 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 PPP6R2O75170 966 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 C1RP00736 705 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 PIGRP01833 764 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 GTF2BQ00403 316 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 YWHAHQ04917 246 aaPredicted RBP12.18□□□□□ -0.46
SORT1-204ENST00000482236 TDGQ13569 410 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 RAB33AQ14088 237 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 BECN1Q14457 450 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 ENOX2Q16206 610 aaKnown RBP12.18□□□□□ -0.46
SORT1-204ENST00000482236 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
SORT1-204ENST00000482236 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
SORT1-204ENST00000482236 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 IQCEQ6IPM2 695 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 FLCNQ8NFG4 579 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 PYM1Q9BRP8 204 aaKnown RBP12.18□□□□□ -0.46
SORT1-204ENST00000482236 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 TMEM206Q9H813 350 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.18□□□□□ -0.46
SORT1-204ENST00000482236 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
SORT1-204ENST00000482236 MRPS23Q9Y3D9 190 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms