RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CSRNP2Q9H175 543 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 NXF3Q9H4D5 531 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 GPRC5CQ9NQ84 441 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MRPL17Q9NRX2 175 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MARCH5Q9NX47 278 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MIOSQ9NXC5 875 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 PPP4R2Q9NY27 417 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 IRAK3Q9Y616 596 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 CNTNAP2Q9UHC6 1331 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 CARNS1A5YM72 827 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 LRRIQ4A6NIV6 560 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 LYPLA2O95372 231 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 NPTXRO95502 500 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 URODP06132 367 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 ARF4P18085 180 aaPredicted RBP9.97□□□□□ -0.81
HLA-B-253ENST00000481849 LIG1P18858 919 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 GLRA2P23416 452 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 ARL2P36404 184 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 RARRES1P49788 294 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 ST3GAL1Q11201 340 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 MTMR3Q13615 1198 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 FOXD4L5Q5VV16 416 aaPredicted RBP9.97□□□□□ -0.81
HLA-B-253ENST00000481849 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 PPFIBP1Q86W92 1011 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 COLGALT2Q8IYK4 626 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
HLA-B-253ENST00000481849 CNNM3Q8NE01 707 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 TMEM175Q9BSA9 504 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 SFXN1Q9H9B4 322 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 PARP2Q9UGN5 583 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 SORCS3Q9UPU3 1222 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 EVPLQ92817 2033 aa9.97□□□□□ -0.81
HLA-B-253ENST00000481849 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
HLA-B-253ENST00000481849 SOD2P04179 222 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 SPATA31D3P0C874 917 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 AVPR2P30518 371 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 AXLP30530 894 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 GLUD2P49448 558 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 CLCN4P51793 760 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
HLA-B-253ENST00000481849 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
HLA-B-253ENST00000481849 ZNF174Q15697 407 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 SPATA31D4Q6ZUB0 917 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 GLYCTKQ8IVS8 523 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC51Q96ER9 411 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 RPS6KC1Q96S38 1066 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 HERC2P3Q9BVR0 1158 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 POLD4Q9HCU8 107 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 MAN1C1Q9NR34 630 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 CACNG4Q9UBN1 327 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
HLA-B-253ENST00000481849 NBEAQ8NFP9 2946 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 TEX28O15482 410 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 MED24O75448 989 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 PCBP1Q15365 356 aaKnown RBP eCLIP9.95□□□□□ -0.82
HLA-B-253ENST00000481849 SLC27A1Q6PCB7 646 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC149Q6ZUS6 474 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 CATSPER3Q86XQ3 398 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 PALB2Q86YC2 1186 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 UBALD2Q8IYN6 164 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 HACE1Q8IYU2 909 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 ZDHHC14Q8IZN3 488 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 KCTD17Q8N5Z5 321 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 HASPINQ8TF76 798 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 C8orf76Q96K31 380 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 COLEC11Q9BWP8 271 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 IRF2BPLQ9H1B7 796 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 STK39Q9UEW8 545 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 DOPEY1Q5JWR5 2465 aa9.95□□□□□ -0.82
HLA-B-253ENST00000481849 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 CCDC195A0A1B0GUA6 201 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 H0Y858 1186 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 RFPL2O75678 378 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 GLUD1P00367 558 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 RPL17P18621 184 aaKnown RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 GSK3AP49840 483 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 RNF144AP50876 292 aaPredicted RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 POU5F1BQ06416 359 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 DSC1Q08554 894 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 GNL2Q13823 731 aaKnown RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 KIAA0319Q5VV43 1072 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 ZNF385CQ66K41 422 aaPredicted RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 OTOP3Q7RTS5 596 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 ZBTB8OSQ8IWT0 167 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 GSTCDQ8NEC7 633 aa9.94□□□□□ -0.82
HLA-B-253ENST00000481849 ST13P5Q8NFI4 369 aaPredicted RBP9.94□□□□□ -0.82
HLA-B-253ENST00000481849 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms