RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 RSAD1Q9HA92 442 aa10.96□□□□□ -0.65
USP39-215ENST00000481409 ZNHIT6Q9NWK9 470 aaKnown RBP10.96□□□□□ -0.65
USP39-215ENST00000481409 TMEM161AQ9NX61 479 aa10.96□□□□□ -0.65
USP39-215ENST00000481409 PARP2Q9UGN5 583 aa10.96□□□□□ -0.65
USP39-215ENST00000481409 BZW2Q9Y6E2 419 aaKnown RBP10.96□□□□□ -0.65
USP39-215ENST00000481409 CENPFP49454 3210 aa10.96□□□□□ -0.66
USP39-215ENST00000481409 KIAA0100Q14667 2235 aaKnown RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 MGEA5O60502 916 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 BAIAP3O94812 1187 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 ASS1P00966 412 aaKnown RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 HLA-DRAP01903 254 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 THP07101 528 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 ACTN1P12814 892 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 RAG1P15918 1043 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 EN2P19622 333 aaPredicted RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 SLC9A1P19634 815 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 FECHP22830 423 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 ANXA13P27216 316 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 LRPAP1P30533 357 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 CASP14P31944 242 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 RPL9P32969 192 aaKnown RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 KRT9P35527 623 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 YWHAEP62258 255 aaKnown RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 MYO1EQ12965 1108 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 IKBKEQ14164 716 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 GPNMBQ14956 572 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 DPY19L2P1Q6NXN4 242 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 CCDC186Q7Z3E2 898 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 LRRC8AQ8IWT6 810 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 EFCAB13Q8IY85 973 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 UROC1Q96N76 676 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 CRACR2AQ9BSW2 395 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 MTMR12Q9C0I1 747 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 WNT8AQ9H1J5 351 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
USP39-215ENST00000481409 DPP3Q9NY33 737 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 AIPL1Q9NZN9 384 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
USP39-215ENST00000481409 ENPP3O14638 875 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 NOL4O94818 638 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 NFICP08651 508 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 KCNJ6P48051 423 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 WNT7BP56706 349 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 POLR2FP61218 127 aaKnown RBP10.94□□□□□ -0.66
USP39-215ENST00000481409 GRIK3Q13003 919 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 PPIGQ13427 754 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP39-215ENST00000481409 GLB1LQ6UWU2 654 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 AGMOQ6ZNB7 445 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 C1orf127Q8N9H9 656 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 TC2NQ8N9U0 490 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 URGCPQ8TCY9 931 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 DDX27Q96GQ7 796 aaKnown RBP10.94□□□□□ -0.66
USP39-215ENST00000481409 ZNF560Q96MR9 790 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 PPP1R10Q96QC0 940 aaKnown RBP10.94□□□□□ -0.66
USP39-215ENST00000481409 SPAG5Q96R06 1193 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 PPP1R12CQ9BZL4 782 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 SIX2Q9NPC8 291 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 ABHD10Q9NUJ1 306 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
USP39-215ENST00000481409 PTPRJQ12913 1337 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 UMODL1Q5DID0 1318 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 ANO9A1A5B4 782 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 ARHGEF37A1IGU5 675 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 ARL5CA6NH57 179 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 MEFVO15553 781 aaPredicted RBP10.93□□□□□ -0.66
USP39-215ENST00000481409 GFPT2O94808 682 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 VNN1O95497 513 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 FERP16591 822 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 AKAP5P24588 427 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 CYP2C18P33260 490 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 STAT1P42224 750 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 FXR1P51114 621 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP39-215ENST00000481409 CCL23P55773 120 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 JAM2P57087 298 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
USP39-215ENST00000481409 MEA1Q16626 185 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 SFMBT2Q5VUG0 894 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 PDXDC1Q6P996 788 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 CYP26C1Q6V0L0 522 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 DPH6Q7L8W6 267 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 RTN4RL1Q86UN2 441 aaPredicted RBP10.93□□□□□ -0.66
USP39-215ENST00000481409 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 HELQQ8TDG4 1101 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 BAP1Q92560 729 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 MRPL9Q9BYD2 267 aaKnown RBP10.93□□□□□ -0.66
USP39-215ENST00000481409 CYP3A43Q9HB55 503 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 DNAJC12Q9UKB3 198 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 HES2Q9Y543 173 aa10.93□□□□□ -0.66
USP39-215ENST00000481409 SSU72P8A0A1W2PR75 194 aa10.92□□□□□ -0.66
USP39-215ENST00000481409 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
USP39-215ENST00000481409 PIRO00625 290 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms