RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ATP8B2P98198 1209 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 TLE1Q04724 770 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 LSM12Q3MHD2 195 aaKnown RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 CRB2Q5IJ48 1285 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 CCSAPQ6IQ19 270 aaPredicted RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 HEATR3Q7Z4Q2 680 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 APBB1IPQ7Z5R6 666 aaPredicted RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 SRGAP1Q7Z6B7 1085 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 TIFAQ96CG3 184 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 C11orf54Q9H0W9 315 aaPredicted RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 GNL3LQ9NVN8 582 aaKnown RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 ABCF2Q9UG63 623 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
CBX3-207ENST00000481300 CLCA2Q9UQC9 943 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 SH3BP1Q9Y3L3 701 aa4.83□□□□□ -1.64
CBX3-207ENST00000481300 ATRNL1Q5VV63 1379 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 KIAA0391O15091 583 aaKnown RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 MYL1P05976 194 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 CD1AP06126 327 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 FTH1P19P0C7X4 201 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 MTHFD1P11586 935 aaKnown RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 HIBADHP31937 336 aaKnown RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 CLRN1P58418 232 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 LLGL1Q15334 1064 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 ANO6Q4KMQ2 910 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SPTY2D1Q68D10 685 aaPredicted RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 DOK3Q7L591 496 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 OVCH2Q7RTZ1 564 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SGMS1Q86VZ5 419 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 GSPT2Q8IYD1 628 aaKnown RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 CCDC146Q8IYE0 955 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 ELOA2Q8IYF1 753 aaPredicted RBP4.82□□□□□ -1.64
CBX3-207ENST00000481300 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SH2D3CQ8N5H7 860 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 MB21D1Q8N884 522 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 ZFP28Q8NHY6 868 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SLC35B2Q8TB61 432 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 TFAP2CQ92754 450 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 MIEF2Q96C03 454 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SLC35A4Q96G79 324 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 PLEKHG4BQ96PX9 1271 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 DMRTA2Q96SC8 542 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 B3GNT5Q9BYG0 378 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 KCNH6Q9H252 994 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 TMEM60Q9H2L4 133 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 SPON1Q9HCB6 807 aa4.82□□□□□ -1.64
CBX3-207ENST00000481300 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 TBKBP1A7MCY6 615 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 GRM6O15303 877 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 PLIN1O60240 522 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 POMCP01189 267 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 GNAI3P08754 354 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 ALAS1P13196 640 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 MGAT1P26572 445 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 CACNB3P54284 484 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 GNAI1P63096 354 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 SNAPC2Q13487 334 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 BMT2Q1RMZ1 405 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 FLYWCH1Q4VC44 716 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
CBX3-207ENST00000481300 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
CBX3-207ENST00000481300 FNDC7Q5VTL7 733 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 ANKS6Q68DC2 871 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 NPNTQ6UXI9 565 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 SEM1Q6ZVN7 128 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 MDGA1Q8NFP4 955 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 NLGN4YQ8NFZ3 816 aaPredicted RBP4.81□□□□□ -1.64
CBX3-207ENST00000481300 ATXN2LQ8WWM7 1075 aaKnown RBP4.81□□□□□ -1.64
CBX3-207ENST00000481300 MYOCQ99972 504 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 PACSIN1Q9BY11 444 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 CNNM1Q9NRU3 951 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 PNPOQ9NVS9 261 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 CEP72Q9P209 647 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 POGKQ9P215 609 aa4.81□□□□□ -1.64
CBX3-207ENST00000481300 TCRBV7S2A1N4TA0A589 114 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 WNT10BO00744 389 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 TPP1O14773 563 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 CYP27B1O15528 508 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 ZBED1O96006 694 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 TYRP14679 529 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 HK1P19367 917 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 AGFG1P52594 562 aaKnown RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 RAB1AP62820 205 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 FAM193AP78312 1265 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 GPSM2P81274 684 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 FGL2Q14314 439 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms