RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 TLR2O60603 784 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 CDK11BP21127 795 aaKnown RBP8.24□□□□□ -1.09
CBX3-206ENST00000481057 ADCY8P40145 1251 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 KRTAP19-4Q3LI73 84 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 TIGD7Q6NT04 549 aaPredicted RBP8.24□□□□□ -1.09
CBX3-206ENST00000481057 RASSF3Q86WH2 238 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 PRSS33Q8NF86 280 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 ZNF496Q96IT1 587 aaPredicted RBP8.24□□□□□ -1.09
CBX3-206ENST00000481057 MYL10Q9BUA6 226 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 TMEM168Q9H0V1 697 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 FBXO10Q9UK96 956 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 FAM208BQ5VWN6 2430 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
CBX3-206ENST00000481057 FLT4P35916 1363 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 C9orf118A6NHY6 69 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 PRPF6O94906 941 aaKnown RBP8.23□□□□□ -1.09
CBX3-206ENST00000481057 STARD3NLO95772 234 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 CYP1A1P04798 512 aaPredicted RBP8.23□□□□□ -1.09
CBX3-206ENST00000481057 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
CBX3-206ENST00000481057 PRKCZQ05513 592 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 TOP3AQ13472 1001 aaPredicted RBP8.23□□□□□ -1.09
CBX3-206ENST00000481057 TMEM200BQ69YZ2 307 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 FRMD7Q6ZUT3 714 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 KANSL1Q7Z3B3 1105 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 CRAMP1Q96RY5 1269 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 PRDM12Q9H4Q4 367 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 ATP6V0A2Q9Y487 856 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 REV3LO60673 3130 aa8.23□□□□□ -1.09
CBX3-206ENST00000481057 MAP1BP46821 2468 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 ELL2O00472 640 aaPredicted RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 CUTAO60888 179 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 RAB11FIP3O75154 756 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 KCNC1P48547 511 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 ZNF280AP59817 542 aaPredicted RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 ADCY2Q08462 1091 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 NFATC3Q12968 1075 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 SLC39A6Q13433 755 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 MOGSQ13724 837 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 IQSEC1Q6DN90 963 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 GRAMD4Q6IC98 578 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 KIAA1841Q6NSI8 718 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 Q6ZUG5 572 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 ESPNLQ6ZVH7 1005 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 CXorf67Q86X51 503 aaPredicted RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 FAM43AQ8N2R8 423 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 KLHL36Q8N4N3 616 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 COG1Q8WTW3 980 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 MBD6Q96DN6 1003 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 RBM17Q96I25 401 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 SLC12A5Q9H2X9 1139 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 DBNDD1Q9H9R9 158 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 NOC2LQ9Y3T9 749 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 MYO9BQ13459 2157 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 PFASO15067 1338 aa8.22□□□□□ -1.09
CBX3-206ENST00000481057 RIF1Q5UIP0 2472 aaKnown RBP8.22□□□□□ -1.09
CBX3-206ENST00000481057 DDX60LQ5H9U9 1706 aaKnown RBP8.21□□□□□ -1.09
CBX3-206ENST00000481057 NOBOXO60393 691 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 EIF5BO60841 1220 aaKnown RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 WDHD1O75717 1129 aaPredicted RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 PRKD3O94806 890 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 APOL3O95236 402 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 ALADP13716 330 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 IBSPP21815 317 aaPredicted RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 IL6STP40189 918 aaPredicted RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 ETV4P43268 484 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 GJA9P57773 515 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 NOLC1Q14978 699 aaKnown RBP eCLIP8.21□□□□□ -1.16e-7■■■□□ 15.8
CBX3-206ENST00000481057 LRRC26Q2I0M4 334 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 ZBTB41Q5SVQ8 909 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 OTOP2Q7RTS6 562 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 REXO1L1PQ8IX06 675 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 SYT8Q8NBV8 401 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 AJUBAQ96IF1 538 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 LCORQ96JN0 433 aaPredicted RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 KATNBL1Q9H079 304 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 VTA1Q9NP79 307 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 TOPORSQ9NS56 1045 aaPredicted RBP8.21□□□□□ -1.1
CBX3-206ENST00000481057 NAV2Q8IVL1 2488 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 RTL9Q8NET4 1388 aa8.21□□□□□ -1.1
CBX3-206ENST00000481057 A0A0G2JNJ9 132 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 ERC2O15083 957 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 BCAR1P56945 870 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 EIF4HQ15056 248 aaKnown RBP8.2□□□□□ -1.1
CBX3-206ENST00000481057 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 ZNF530Q6P9A1 599 aaPredicted RBP8.2□□□□□ -1.1
CBX3-206ENST00000481057 UNQ6494/PRO21346Q6UXR6 183 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 FERMT2Q96AC1 680 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 PITHD1Q9GZP4 211 aaPredicted RBP8.2□□□□□ -1.1
CBX3-206ENST00000481057 BARX1Q9HBU1 254 aaPredicted RBP8.2□□□□□ -1.1
CBX3-206ENST00000481057 MYOZ2Q9NPC6 264 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 TERF2IPQ9NYB0 399 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms