RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 DDX3XO00571 662 aaKnown RBP eCLIP10.8□□□□□ -0.683e-7■■□□□ 12.4
COMMD4-203ENST00000480484 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 GNA14O95837 355 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 FERP16591 822 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 STX2P32856 288 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ADCY7P51828 1080 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 POLE2P56282 527 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TRAF1Q13077 416 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 MAPK7Q13164 816 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ZCCHC8Q6NZY4 707 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TMEM154Q6P9G4 183 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 JPH3Q8WXH2 748 aaPredicted RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SH2D3AQ9BRG2 576 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 RAB34Q9BZG1 259 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 CCDC134Q9H6E4 229 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 CTNNAL1Q9UBT7 734 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TBK1Q9UHD2 729 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 BRCA2P51587 3418 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 FOCADQ5VW36 1801 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 RIPK2O43353 540 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TARSP26639 723 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 NCOA4Q13772 614 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ARSHQ5FYA8 562 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 CWF19L1Q69YN2 538 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 INTS8Q75QN2 995 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SP8Q8IXZ3 490 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TIFAQ96CG3 184 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ARHGEF26Q96DR7 871 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 RAB3IPQ96QF0 476 aaPredicted RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 NUDCD1Q96RS6 583 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SYT15Q9BQS2 421 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ZC3H12CQ9C0D7 883 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 DNAJC18Q9H819 358 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 DLGAP2Q9P1A6 1054 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ARMCX3Q9UH62 379 aaPredicted RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SERPINB13Q9UIV8 391 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 A6NJY4 79 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 MED24O75448 989 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 MTA2O94776 668 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 OAS1P00973 400 aaKnown RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■□□□ 13.1
COMMD4-203ENST00000480484 OCLNQ16625 522 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ZNF449Q6P9G9 518 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 ILDR2Q71H61 639 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SLFN11Q7Z7L1 901 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 PHLDB2Q86SQ0 1253 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 MYO1HQ8N1T3 1032 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 TEX9Q8N6V9 391 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 CTNNBL1Q8WYA6 563 aaPredicted RBP10.8□□□□□ -0.68
COMMD4-203ENST00000480484 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 FAM118BQ9BPY3 351 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 SYNPO2Q9UMS6 1093 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
COMMD4-203ENST00000480484 KLRG2A4D1S0 409 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 TISP43B9A030 160 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SPTLC1O15269 473 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 YY1P25490 414 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 PON1P27169 355 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SSR1P43307 286 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 MCL1Q07820 350 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 ZNF543Q08ER8 600 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 PLS1Q14651 629 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SPDYCQ5MJ68 293 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 APOBEC3HQ6NTF7 200 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 ASRGL1Q7L266 308 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 KIAA0825Q8IV33 1275 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 RDH13Q8NBN7 331 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 ZSWIM2Q8NEG5 633 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 NAP1L3Q99457 506 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 COA1Q9GZY4 146 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 HAO1Q9UJM8 370 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 FAM187AA6NFU0 413 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 AKAP3O75969 853 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 TTLL1O95922 423 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 AFPP02771 609 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 MUM1Q2TAK8 710 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 RNF220Q5VTB9 566 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 C16orf54Q6UWD8 224 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 PRUNE1Q86TP1 453 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 ALG3Q92685 438 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 UTP4Q969X6 686 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SMAD5Q99717 465 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 RNPEPL1Q9HAU8 725 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SRA1Q9HD15 236 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 GRHL1Q9NZI5 618 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 SBF1O95248 1867 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 DDX3YO15523 660 aaKnown RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 UNC5CO95185 931 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 CTSHP09668 335 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 CALB2P22676 271 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 KCNJ1P48048 391 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms