RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ITGB8P26012 769 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 RFC2P35250 354 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 MYL6P60660 151 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 TRPC3Q13507 836 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 WDR44Q5JSH3 913 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 IQCEQ6IPM2 695 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 RRAGAQ7L523 313 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 ZNF598Q86UK7 904 aaKnown RBP18.95■□□□□ 0.62
UPF3A-206ENST00000480362 ARHGEF19Q8IW93 802 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 LRRC8AQ8IWT6 810 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 TMEM130Q8N3G9 435 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 C1orf127Q8N9H9 656 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 BAP1Q92560 729 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 TATDN2Q93075 761 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 ELMO3Q96BJ8 720 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 ZFP42Q96MM3 310 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 NT5C1BQ96P26 610 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 GAD1Q99259 594 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 APEX2Q9UBZ4 518 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 FBXL5Q9UKA1 691 aa18.95■□□□□ 0.62
UPF3A-206ENST00000480362 AJAP1Q9UKB5 411 aaPredicted RBP18.95■□□□□ 0.62
UPF3A-206ENST00000480362 TRIP11Q15643 1979 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 PTGESO14684 152 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 EOMESO95936 686 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 ITGB3P05106 788 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 KRT19P08727 400 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 MLH1P40692 756 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 GUCY2FP51841 1108 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 BEST2Q8NFU1 509 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 C18orf25Q96B23 403 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 TRIM44Q96DX7 344 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 ZNF830Q96NB3 372 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 RPS6KC1Q96S38 1066 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 NAA15Q9BXJ9 866 aaKnown RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 RSAD1Q9HA92 442 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 UBE2TQ9NPD8 197 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 UBN1Q9NPG3 1134 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 SIX4Q9UIU6 781 aa18.94■□□□□ 0.62
UPF3A-206ENST00000480362 UBQLN1Q9UMX0 589 aaKnown RBP18.94■□□□□ 0.62
UPF3A-206ENST00000480362 ARL5CA6NH57 179 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 XPOTO43592 962 aaKnown RBP18.93■□□□□ 0.62
UPF3A-206ENST00000480362 SGSM1Q2NKQ1 1148 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 PDXDC1Q6P996 788 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 GSTCDQ8NEC7 633 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 CXorf38Q8TB03 319 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 PANX2Q96RD6 677 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 STK33Q9BYT3 514 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 ABHD10Q9NUJ1 306 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 MIOSQ9NXC5 875 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 ITGA11Q9UKX5 1188 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 AGAP1Q9UPQ3 857 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 DAAM1Q9Y4D1 1078 aa18.93■□□□□ 0.62
UPF3A-206ENST00000480362 LRRC53A6NM62 1247 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 ASS1P00966 412 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 RFX1P22670 979 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 AFF1P51825 1210 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 RBP5P82980 135 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 RAPGEF1Q13905 1077 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 SPOPLQ6IQ16 392 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 MFSD5Q6N075 450 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 CNKSR3Q6P9H4 555 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 PPM1KQ8N3J5 372 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 TMEM199Q8N511 208 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 HELQQ8TDG4 1101 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 PPP1R10Q96QC0 940 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 SPAG5Q96R06 1193 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 DNAJC7Q99615 494 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 IMPG2Q9BZV3 1241 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 ELAC1Q9H777 363 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 PLAGL2Q9UPG8 496 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 R3HCC1Q9Y3T6 440 aaKnown RBP18.92■□□□□ 0.62
UPF3A-206ENST00000480362 BRCA2P51587 3418 aa18.92■□□□□ 0.62
UPF3A-206ENST00000480362 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 OFD1O75665 1012 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 CLSTN1O94985 981 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 THP07101 528 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 CSF2RAP15509 400 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 CYP3A5P20815 502 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 SCNN1GP51170 649 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 MFAP3P55082 362 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 IKBKEQ14164 716 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 DRAP1Q14919 205 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 ARHGAP44Q17R89 818 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 ZNF699Q32M78 642 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 HS1BP3Q53T59 392 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 TAF4BQ92750 862 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 KAT5Q92993 513 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 ABHD8Q96I13 439 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 XYLT2Q9H1B5 865 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 NUCKS1Q9H1E3 243 aaKnown RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 KCNF1Q9H3M0 494 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 APOBEC3GQ9HC16 384 aaKnown RBP18.91■□□□□ 0.62
UPF3A-206ENST00000480362 TMEM161AQ9NX61 479 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms