RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ENPEPQ07075 957 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 PAK1Q13153 545 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 ADAM9Q13443 819 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 CAMK1Q14012 370 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 PDE12Q6L8Q7 609 aaKnown RBP21.38■■□□□ 1.01
LIME1-205ENST00000480139 WDR49Q8IV35 697 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 RNF168Q8IYW5 571 aaPredicted RBP21.38■■□□□ 1.01
LIME1-205ENST00000480139 RDH13Q8NBN7 331 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 CACTINQ8WUQ7 758 aaKnown RBP21.38■■□□□ 1.01
LIME1-205ENST00000480139 MYLIPQ8WY64 445 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 SYAP1Q96A49 352 aaPredicted RBP21.38■■□□□ 1.01
LIME1-205ENST00000480139 TLR9Q9NR96 1032 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 CACNG4Q9UBN1 327 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 PODXLO00592 558 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 CETN3O15182 167 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 PSMC2P35998 433 aaKnown RBP21.37■■□□□ 1.01
LIME1-205ENST00000480139 CASP4P49662 377 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 NLRP12P59046 1061 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 MCCD1P59942 119 aaPredicted RBP21.37■■□□□ 1.01
LIME1-205ENST00000480139 FKBP3Q00688 224 aaKnown RBP21.37■■□□□ 1.01
LIME1-205ENST00000480139 TTI2Q6NXR4 508 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 NELFBQ8WX92 580 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 CGRRF1Q99675 332 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 VN1R3Q9BXE9 311 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 TMEM63CQ9P1W3 806 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 DACH1Q9UI36 760 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 MTCH2Q9Y6C9 303 aa21.37■■□□□ 1.01
LIME1-205ENST00000480139 SF3B1O75533 1304 aaKnown RBP eCLIP21.36■■□□□ 1.01
LIME1-205ENST00000480139 TRIM49BA6NDI0 452 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 F8W810 466 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 FSCN2O14926 492 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 SLC16A3O15427 465 aaKnown RBP21.36■■□□□ 1.01
LIME1-205ENST00000480139 TADA2AO75478 443 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 AKAP3O75969 853 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 B3GAT3O94766 335 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 PAX3P23760 479 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 CLDN10P78369 228 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 ELAVL2Q12926 359 aaKnown RBP21.36■■□□□ 1.01
LIME1-205ENST00000480139 CT47A1Q5JQC4 288 aaPredicted RBP21.36■■□□□ 1.01
LIME1-205ENST00000480139 CEP135Q66GS9 1140 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 KLHL10Q6JEL2 608 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 FUT10Q6P4F1 479 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 INTS8Q75QN2 995 aaKnown RBP21.36■■□□□ 1.01
LIME1-205ENST00000480139 USP37Q86T82 979 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 TMC2Q8TDI7 906 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 PARD3BQ8TEW8 1205 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 RABGGTAQ92696 567 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 FNBP1Q96RU3 617 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 GZF1Q9H116 711 aaPredicted RBP21.36■■□□□ 1.01
LIME1-205ENST00000480139 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 DPP3Q9NY33 737 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 RWDD2AQ9UIY3 292 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 CTNND2Q9UQB3 1225 aa21.36■■□□□ 1.01
LIME1-205ENST00000480139 ANO9A1A5B4 782 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 SOD2P04179 222 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 FOSL2P15408 326 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 TFAMQ00059 246 aaKnown RBP21.35■■□□□ 1.01
LIME1-205ENST00000480139 SKOR2Q2VWA4 1001 aaPredicted RBP21.35■■□□□ 1.01
LIME1-205ENST00000480139 DPCR1Q3MIW9 517 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 TIGD5Q53EQ6 642 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 C9orf57Q5W0N0 161 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 CD300LGQ6UXG3 332 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 GPR65Q8IYL9 337 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 FAM186BQ8IYM0 893 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 C3orf58Q8NDZ4 430 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 CEP63Q96MT8 703 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 HERC2P3Q9BVR0 1158 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 ZBP1Q9H171 429 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 NGRNQ9NPE2 291 aaKnown RBP21.35■■□□□ 1.01
LIME1-205ENST00000480139 ITGA11Q9UKX5 1188 aa21.35■■□□□ 1.01
LIME1-205ENST00000480139 PTPRJQ12913 1337 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 PIRO00625 290 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 TRAPPC3O43617 180 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 TMEM191BP0C7N4 346 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 CTSAP10619 480 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 AP3M2P53677 418 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 ERVFC1P60507 584 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 BMS1Q14692 1282 aaKnown RBP21.34■■□□□ 1.01
LIME1-205ENST00000480139 DUOXA2Q1HG44 320 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 CAVIN1Q6NZI2 390 aaKnown RBP21.34■■□□□ 1.01
LIME1-205ENST00000480139 VPS52Q8N1B4 723 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 CCDC127Q96BQ5 260 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 ANKRD36BP1Q96IX9 119 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 DUSP9Q99956 384 aaKnown RBP21.34■■□□□ 1.01
LIME1-205ENST00000480139 TCF25Q9BQ70 676 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 MTMR12Q9C0I1 747 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 CHST7Q9NS84 486 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 IRAK3Q9Y616 596 aa21.34■■□□□ 1.01
LIME1-205ENST00000480139 TNNC2P02585 160 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 DLATP10515 647 aaKnown RBP21.33■■□□□ 1.01
LIME1-205ENST00000480139 IGFBP4P22692 258 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 ERCC5P28715 1186 aaPredicted RBP21.33■■□□□ 1.01
LIME1-205ENST00000480139 AARSP49588 968 aaKnown RBP eCLIP21.33■■□□□ 1.01
LIME1-205ENST00000480139 GUCY2FP51841 1108 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 BFSP1Q12934 665 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 SMC1AQ14683 1233 aaKnown RBP21.33■■□□□ 1.01
LIME1-205ENST00000480139 SASS6Q6UVJ0 657 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 C1orf127Q8N9H9 656 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 CXorf38Q8TB03 319 aa21.33■■□□□ 1.01
LIME1-205ENST00000480139 PLEKHO2Q8TD55 490 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms