RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 PUS10Q3MIT2 529 aaKnown RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 ZNF248Q8NDW4 579 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 MYL10Q9BUA6 226 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 VPS11Q9H270 941 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 ING3Q9NXR8 418 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 RBM8AQ9Y5S9 174 aaKnown RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 HIST1H2ABP04908 130 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 NOS3P29474 1203 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 EPHB3P54753 998 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 ZNF667Q5HYK9 610 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 HIST3H2AQ7L7L0 130 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 MRPL50Q8N5N7 158 aaKnown RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 HIST1H2ACQ93077 130 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 INTS2Q9H0H0 1204 aaKnown RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 LDAHQ9H6V9 325 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 HDAC6Q9UBN7 1215 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 DYRK1BQ9Y463 629 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 ERBINQ96RT1 1412 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 A6NCN8 305 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 NFKB1P19838 968 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 CXCR2P25025 360 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 AXLP30530 894 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 PRIM2P49643 509 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 HNMTP50135 292 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
TTC3-216ENST00000479930 HCAR2Q8TDS4 363 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 FAM129BQ96TA1 746 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 MID2Q9UJV3 735 aa9.41□□□□□ -0.9
TTC3-216ENST00000479930 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 USP27XA6NNY8 438 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 PFDN1O60925 122 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 NDUFS3O75489 264 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 GNA14O95837 355 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 CNPP09543 421 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 FASTKD1Q53R41 847 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 LNPEPQ9UIQ6 1025 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 KRIT1O00522 736 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 HALP42357 657 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 MAPKAPK2P49137 400 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 ALDH9A1P49189 494 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 KCNQ4P56696 695 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 UBXN2BQ14CS0 331 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 CROCCP2Q86T23 111 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 CPT1CQ8TCG5 803 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 CERS4Q9HA82 394 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 IFT52Q9Y366 437 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 TRIM3O75382 744 aaPredicted RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 CKMP06732 381 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 ENO1P06733 434 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 PSMA4P25789 261 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 TRIP13Q15645 432 aaPredicted RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 PPP1R36Q96LQ0 422 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 WDR41Q9HAD4 459 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 KITP10721 976 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 RHAGQ02094 409 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 INPP5DQ92835 1189 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 MRPL39Q9NYK5 338 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 KIF1CO43896 1103 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 PFKFB2O60825 505 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 MT-ND3P03897 115 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 LYNP07948 512 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 ITIH2P19823 946 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 SNRNP48Q6IEG0 339 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 PEG10Q86TG7 708 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 SLC25A41Q8N5S1 370 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.9
TTC3-216ENST00000479930 CARD6Q9BX69 1037 aa9.4□□□□□ -0.9
TTC3-216ENST00000479930 ARL5CA6NH57 179 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 MASP1P48740 699 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 STX4Q12846 297 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 GNASQ5JWF2 1037 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 NEK10Q6ZWH5 1172 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 DDI1Q8WTU0 396 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 NELFBQ8WX92 580 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 SAAL1Q96ER3 474 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.91
TTC3-216ENST00000479930 ZNF354BQ96LW1 612 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 NEK6Q9HC98 313 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 POU2F3Q9UKI9 436 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 SUPT6HQ7KZ85 1726 aaKnown RBP9.4□□□□□ -0.91
TTC3-216ENST00000479930 ATP9BO43861 1147 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 KRT6AP02538 564 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 KRT6BP04259 564 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 KRT6CP48668 564 aa9.4□□□□□ -0.91
TTC3-216ENST00000479930 ANXA11P50995 505 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms