RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HSPA9P38646 679 aaKnown RBP13.92□□□□□ -0.18
SEC13-216ENST00000479868 NCOA4Q13772 614 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
SEC13-216ENST00000479868 PHLDB2Q86SQ0 1253 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 ZNF677Q86XU0 584 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 RHPN2Q8IUC4 686 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA6L1Q8N7Z2 621 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 TCP11Q8WWU5 503 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 TRIM7Q9C029 511 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 DPH5Q9H2P9 285 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 MROH8Q9H579 483 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 PCDHB4Q9Y5E5 795 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 PCNTO95613 3336 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 ABLIM1O14639 778 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 OPA1O60313 960 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
SEC13-216ENST00000479868 CYP1A1P04798 512 aaPredicted RBP13.91□□□□□ -0.18
SEC13-216ENST00000479868 RRM1P23921 792 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 BPIFB4P59827 614 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 DR1Q01658 176 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 EAPPQ56P03 285 aaPredicted RBP13.91□□□□□ -0.18
SEC13-216ENST00000479868 TRIM31Q9BZY9 425 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 ANAPC7Q9UJX3 599 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 UTP11Q9Y3A2 253 aaKnown RBP13.91□□□□□ -0.18
SEC13-216ENST00000479868 PCDHA3Q9Y5H8 950 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 MROH7Q68CQ1 1323 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 TCRBV7S2A1N4TA0A589 114 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA8KD6RF30 607 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
SEC13-216ENST00000479868 CTNNA2P26232 953 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 CENPCQ03188 943 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 CLUL1Q15846 466 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 MAPK6Q16659 721 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 SEL1L2Q5TEA6 688 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 PASD1Q8IV76 773 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 FAM76AQ8TAV0 307 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 C18orf8Q96DM3 657 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 MGAMO43451 1857 aa13.91□□□□□ -0.18
SEC13-216ENST00000479868 GNA15P30679 374 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 PPFIA1Q13136 1202 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 GJC2Q5T442 439 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 MON1BQ7L1V2 547 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 RBBP8NLQ8NC74 664 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 OGTO15294 1046 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 B4GALT5O43286 388 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 MAPK4P31152 587 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 HSD17B3P37058 310 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 CLCN3P51790 818 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 MCL1Q07820 350 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 UAP1Q16222 522 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 PPP2R5EQ16537 467 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 ARMCX2Q7L311 632 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 CDR2LQ86X02 465 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 SMARCAD1Q9H4L7 1026 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
SEC13-216ENST00000479868 CNTN6Q9UQ52 1028 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 PLAAQ9Y263 795 aa13.9□□□□□ -0.18
SEC13-216ENST00000479868 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 PHF2O75151 1096 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
SEC13-216ENST00000479868 NOMO3P69849 1222 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 TTLL4Q14679 1199 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 TTC27Q6P3X3 843 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 ABRAQ8N0Z2 381 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 RAB17Q9H0T7 212 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
SEC13-216ENST00000479868 HSPA6P17066 643 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 PROZP22891 400 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 ACTN2P35609 894 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 RWDD2BP57060 319 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 MYL6P60660 151 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
SEC13-216ENST00000479868 LLGL1Q15334 1064 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 SLC13A5Q86YT5 568 aaPredicted RBP13.89□□□□□ -0.19
SEC13-216ENST00000479868 CD302Q8IX05 232 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
SEC13-216ENST00000479868 ANK1P16157 1881 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms