RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 CHST2Q9Y4C5 530 aa6.95□□□□□ -1.3
CCDC58-204ENST00000479414 KIAA0391O15091 583 aaKnown RBP6.94□□□□□ -1.3
CCDC58-204ENST00000479414 RECQL4O94761 1208 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 ALDH2P05091 517 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 SBK3P0C264 359 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 SLC6A4P31645 630 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 GRM3Q14832 879 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 AGAP9Q5VTM2 703 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 MED25Q71SY5 747 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 HEATR3Q7Z4Q2 680 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 SPRED1Q7Z699 444 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 COL23A1Q86Y22 540 aaPredicted RBP6.94□□□□□ -1.3
CCDC58-204ENST00000479414 ZFPM1Q8IX07 1006 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 ZBTB34Q8NCN2 500 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
CCDC58-204ENST00000479414 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 NEU1Q99519 415 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
CCDC58-204ENST00000479414 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 PCDHA3Q9Y5H8 950 aa6.94□□□□□ -1.3
CCDC58-204ENST00000479414 AHRRA9YTQ3 701 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 F2RL2O00254 374 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 ERC2O15083 957 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 SLC43A1O75387 559 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 HAUS5O94927 633 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 PEX11BO96011 259 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 C1SP09871 688 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 GCSHP23434 173 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 SLC6A2P23975 617 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
CCDC58-204ENST00000479414 SLC25A3Q00325 362 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 FOXE3Q13461 319 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 MIIPQ5JXC2 388 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 DENND1CQ8IV53 801 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 RHOT2Q8IXI1 618 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 TIFAQ96CG3 184 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 CDK5RAP3Q96JB5 506 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 CGRRF1Q99675 332 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 GSTO2Q9H4Y5 243 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 WDCPQ9H6R7 721 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 LMBRD1Q9NUN5 540 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 OBP2AQ9NY56 170 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
CCDC58-204ENST00000479414 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 GOLGA6BA6NDN3 693 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 SCAF4O95104 1147 aaKnown RBP6.92□□□□□ -1.3
CCDC58-204ENST00000479414 ITGB1P05556 798 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 TYRP14679 529 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 NKX6-1P78426 367 aaPredicted RBP6.92□□□□□ -1.3
CCDC58-204ENST00000479414 FLYWCH1Q4VC44 716 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 OVCH2Q7RTZ1 564 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 GDF7Q7Z4P5 450 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 FAM90A1Q86YD7 464 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 FITM2Q8N6M3 262 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 FAM193BQ96PV7 902 aaPredicted RBP6.92□□□□□ -1.3
CCDC58-204ENST00000479414 LRFN3Q9BTN0 628 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 SLC46A2Q9BY10 475 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 PACSIN1Q9BY11 444 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 GABBR1Q9UBS5 961 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 STXBP5LQ9Y2K9 1186 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 NR2E3Q9Y5X4 410 aa6.92□□□□□ -1.3
CCDC58-204ENST00000479414 FAM20BO75063 409 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 PRDX5P30044 214 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 PDCD4Q53EL6 469 aaKnown RBP6.91□□□□□ -1.3
CCDC58-204ENST00000479414 HSP90AB2PQ58FF8 381 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 ZNF365Q70YC5 407 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 CAMKK1Q8N5S9 505 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 OR56A1Q8NGH5 318 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 PHACTR3Q96KR7 559 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 REXO4Q9GZR2 422 aaKnown RBP6.91□□□□□ -1.3
CCDC58-204ENST00000479414 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
CCDC58-204ENST00000479414 KLHL11Q9NVR0 708 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 ABCF2Q9UG63 623 aa6.91□□□□□ -1.3
CCDC58-204ENST00000479414 FEZ2Q9UHY8 353 aaPredicted RBP6.91□□□□□ -1.3
CCDC58-204ENST00000479414 GAGE12BA1L429 117 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 CDHR4A6H8M9 788 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 ZNF185O15231 689 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 CTNND1O60716 968 aaKnown RBP6.9□□□□□ -1.3
CCDC58-204ENST00000479414 UBXN7O94888 489 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 PRSS23O95084 383 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 INSRRP14616 1297 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 TBX4P57082 545 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 ZXDCQ2QGD7 858 aaPredicted RBP6.9□□□□□ -1.3
CCDC58-204ENST00000479414 GFOD2Q3B7J2 385 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 ARHGAP29Q52LW3 1261 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 KLHDC4Q8TBB5 520 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 C1orf112Q9NSG2 853 aa6.9□□□□□ -1.3
CCDC58-204ENST00000479414 PNPOQ9NVS9 261 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms