RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 MARCH5Q9NX47 278 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 RWDD2AQ9UIY3 292 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 RFXAPO00287 272 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 PODXLO00592 558 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 EFEMP2O95967 443 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 CASP4P49662 377 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 CLCNKBP51801 687 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 AP3M2P53677 418 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 MCCD1P59942 119 aaPredicted RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 DUOXA2Q1HG44 320 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 TTI2Q6NXR4 508 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 INTS8Q75QN2 995 aaKnown RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 TMEM173Q86WV6 379 aaPredicted RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 BCL7CQ8WUZ0 217 aaPredicted RBP15.13■□□□□ 0.01
PCIF1-202ENST00000479348 ANKRD36BP1Q96IX9 119 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 CEP63Q96MT8 703 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 DPP3Q9NY33 737 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 TUBGCP4Q9UGJ1 667 aa15.13■□□□□ 0.01
PCIF1-202ENST00000479348 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 PDCD11Q14690 1871 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 LAMA3Q16787 3333 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 ANO9A1A5B4 782 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 IKBKBO14920 756 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 SLC16A3O15427 465 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 AKAP3O75969 853 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 KIF4AO95239 1232 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 FGFR1OPO95684 399 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 TNNC2P02585 160 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 TMEM191BP0C7N4 346 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 KRT13P13646 458 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 ERCC5P28715 1186 aaPredicted RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 WNT7BP56706 349 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 CLDN10P78369 228 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 CAVIN1Q6NZI2 390 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 FUT10Q6P4F1 479 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 FAM186BQ8IYM0 893 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 RNF168Q8IYW5 571 aaPredicted RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 VPS52Q8N1B4 723 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 MYLIPQ8WY64 445 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 CGRRF1Q99675 332 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
PCIF1-202ENST00000479348 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 MTCH2Q9Y6C9 303 aa15.12■□□□□ 0.01
PCIF1-202ENST00000479348 ANK1P16157 1881 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 TRIM49BA6NDI0 452 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 SOD2P04179 222 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 DLATP10515 647 aaKnown RBP15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CTSAP10619 480 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 TNNI1P19237 187 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 IGFBP4P22692 258 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 DNAJB1P25685 340 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 PNPLA4P41247 253 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CAMK1Q14012 370 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 ADGRE1Q14246 886 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 DPCR1Q3MIW9 517 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 C9orf57Q5W0N0 161 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 FILIP1Q7Z7B0 1213 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 RABGGTAQ92696 567 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 PPP2R3CQ969Q6 453 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CCDC127Q96BQ5 260 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 DUSP9Q99956 384 aaKnown RBP15.11■□□□□ 0.01
PCIF1-202ENST00000479348 HERC2P3Q9BVR0 1158 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CACNG4Q9UBN1 327 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
PCIF1-202ENST00000479348 LAMA2P24043 3122 aaKnown RBP15.11■□□□□ 0.01
PCIF1-202ENST00000479348 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 ARHGEF37A1IGU5 675 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 F8W810 466 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
PCIF1-202ENST00000479348 PIRO00625 290 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 FSCN2O14926 492 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 GNA14O95837 355 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 FOSL2P15408 326 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 VAMP7P51809 220 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 ERVFC1P60507 584 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 BFSP1Q12934 665 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 SMC1AQ14683 1233 aaKnown RBP15.1■□□□□ 0.01
PCIF1-202ENST00000479348 USP41Q3LFD5 358 aa15.1■□□□□ 0.01
PCIF1-202ENST00000479348 PDXDC1Q6P996 788 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms