RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
RFC4-212ENST00000479307 CDK5RAP3Q96JB5 506 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 FAM167AQ96KS9 214 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 ENKD1Q9H0I2 346 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 NELFAQ9H3P2 528 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 MOCS1Q9NZB8 636 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 STXBP5LQ9Y2K9 1186 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 MROH1Q8NDA8 1641 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.28□□□□□ -1.4
RFC4-212ENST00000479307 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
RFC4-212ENST00000479307 CHD2O14647 1828 aaKnown RBP6.27□□□□□ -1.41
RFC4-212ENST00000479307 RTEL1-TNFRSF6BF6WH68 1400 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SETD5Q9C0A6 1442 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ADCY6O43306 1168 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SASH1O94885 1247 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ZBED1O96006 694 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ALDH2P05091 517 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 TRIM27P14373 513 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 CR2P20023 1033 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 FLT3LGP49771 235 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 GZMKP49863 264 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 TARDBPQ13148 414 aaKnown RBP eCLIP6.27□□□□□ -1.41
RFC4-212ENST00000479307 RIN1Q13671 783 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SLFN13Q68D06 897 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 ADGRE4PQ86SQ3 457 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SHCBP1Q8NEM2 672 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 IL17RAQ96F46 866 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 CGRRF1Q99675 332 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 SARGQ9BW04 601 aa6.27□□□□□ -1.41
RFC4-212ENST00000479307 DDX20Q9UHI6 824 aaKnown RBP6.27□□□□□ -1.41
RFC4-212ENST00000479307 DHX29Q7Z478 1369 aaKnown RBP6.27□□□□□ -1.41
RFC4-212ENST00000479307 PIK3C2BO00750 1634 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 A0A1W2PRX2 142 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 LAMTOR5O43504 91 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 TRIM13O60858 407 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 AMY1AP04745 511 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 PHKG2P15735 406 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 DDCP20711 480 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 HTR1BP28222 390 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 PTPN7P35236 360 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
RFC4-212ENST00000479307 CASRP41180 1078 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 MAP2K6P52564 334 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 AGFG1P52594 562 aaKnown RBP6.26□□□□□ -1.41
RFC4-212ENST00000479307 HK3P52790 923 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 USP14P54578 494 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 APBA1Q02410 837 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 NOGQ13253 232 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 MTM1Q13496 603 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 SAFB2Q14151 953 aaKnown RBP eCLIP6.26□□□□□ -1.41
RFC4-212ENST00000479307 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 CCDC157Q569K6 752 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 FAM47AQ5JRC9 791 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 PRAMEF14Q5SWL7 426 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 PPP1R35Q8TAP8 253 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 IFI44Q8TCB0 444 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 TIFAQ96CG3 184 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 MTFMTQ96DP5 389 aaKnown RBP6.26□□□□□ -1.41
RFC4-212ENST00000479307 TMX3Q96JJ7 454 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 LMF1Q96S06 567 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 PTPN18Q99952 460 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 TCF25Q9BQ70 676 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 C12orf65Q9H3J6 166 aaKnown RBP6.26□□□□□ -1.41
RFC4-212ENST00000479307 DDX21Q9NR30 783 aaKnown RBP eCLIP6.26□□□□□ -1.41
RFC4-212ENST00000479307 NCDNQ9UBB6 729 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 AJAP1Q9UKB5 411 aaPredicted RBP6.26□□□□□ -1.41
RFC4-212ENST00000479307 NR2E3Q9Y5X4 410 aa6.26□□□□□ -1.41
RFC4-212ENST00000479307 NCOA3Q9Y6Q9 1424 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 TPP1O14773 563 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 CDC14BO60729 498 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 FTH1P19P0C7X4 201 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 ALOX15P16050 662 aaPredicted RBP6.25□□□□□ -1.41
RFC4-212ENST00000479307 CTXN1P60606 82 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 PTH1RQ03431 593 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 TLE1Q04724 770 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 MRPL49Q13405 166 aaKnown RBP6.25□□□□□ -1.41
RFC4-212ENST00000479307 ACAP1Q15027 740 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 KSR2Q6VAB6 950 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 GADL1Q6ZQY3 521 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 DAAM2Q86T65 1068 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 KIAA0319LQ8IZA0 1049 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 KLHDC4Q8TBB5 520 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 MDM1Q8TC05 714 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 ARL8AQ96BM9 186 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 BORCS6Q96GS4 357 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 DMRTA2Q96SC8 542 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 DPYSL5Q9BPU6 564 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 ASXL1Q8IXJ9 1541 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 ATRNO75882 1429 aa6.25□□□□□ -1.41
RFC4-212ENST00000479307 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms