RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 IRAK3Q9Y616 596 aa10.66□□□□□ -0.7
NIFK-205ENST00000477693 SMIM28A0A1B0GU29 152 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 OGTO15294 1046 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
NIFK-205ENST00000477693 CSPG5O95196 566 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 CLTAP09496 248 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MYBP10242 640 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 CTSAP10619 480 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
NIFK-205ENST00000477693 KCNE1P15382 129 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 BMP6P22004 513 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MATR3P43243 847 aaKnown RBP eCLIP10.65□□□□□ -0.7
NIFK-205ENST00000477693 OSTNP61366 133 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 KCNA1Q09470 495 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 PAK1Q13153 545 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MYBPC2Q14324 1141 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
NIFK-205ENST00000477693 BMT2Q1RMZ1 405 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 CTC1Q2NKJ3 1217 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 SLC10A6Q3KNW5 377 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 SPATA1Q5VX52 437 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 PLPP4Q5VZY2 271 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 CENPPQ6IPU0 288 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 ADGRD2Q7Z7M1 963 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MICAL1Q8TDZ2 1067 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 TMEM174Q8WUU8 243 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 ACCSQ96QU6 501 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 MSTO1Q9BUK6 570 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 COLEC11Q9BWP8 271 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 TMEM206Q9H813 350 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
NIFK-205ENST00000477693 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 SLC38A7Q9NVC3 462 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 TBC1D7Q9P0N9 293 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 EXOC7Q9UPT5 735 aa10.65□□□□□ -0.7
NIFK-205ENST00000477693 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.7
NIFK-205ENST00000477693 TDRD15B5MCY1 1934 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 CASTOR2A6NHX0 329 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 ANKRD63C9JTQ0 380 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 SOD2P04179 222 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 ADRB2P07550 413 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 CCNE1P24864 410 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 CASP1P29466 404 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 ADSSP30520 456 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 PRCPP42785 496 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 NRIP1P48552 1158 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 MRPS5P82675 430 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 POU5F1Q01860 360 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 SPAG1Q07617 926 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 STK4Q13043 487 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 IQCB1Q15051 598 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 DUSP6Q16828 381 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 AAK1Q2M2I8 961 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 SEZ6Q53EL9 994 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 GLRA4Q5JXX5 417 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 GAS2L3Q86XJ1 694 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 EFHBQ8N7U6 833 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 MRPL43Q8N983 215 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 ZNF507Q8TCN5 953 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 UROC1Q96N76 676 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 ZMAT2Q96NC0 199 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 TSPAN18Q96SJ8 248 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 TSG101Q99816 390 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 GRPEL1Q9HAV7 217 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
NIFK-205ENST00000477693 CPSF3Q9UKF6 684 aaKnown RBP10.64□□□□□ -0.71
NIFK-205ENST00000477693 C2orf71A6NGG8 1288 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 HIDE1A8MVS5 230 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 TISP43B9A030 160 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 F8W810 466 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 PDXKO00764 312 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 LILRB3O75022 631 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 KIF4AO95239 1232 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 GNA14O95837 355 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 CXCL8P10145 99 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 GARTP22102 1010 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 RPL13P26373 211 aaKnown RBP10.63□□□□□ -0.71
NIFK-205ENST00000477693 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIFK-205ENST00000477693 LTBRP36941 435 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 TNFSF9P41273 254 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 TFF2Q03403 129 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 PPP2R3AQ06190 1150 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 SOX4Q06945 474 aaPredicted RBP10.63□□□□□ -0.71
NIFK-205ENST00000477693 ADAM15Q13444 863 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 KCNC3Q14003 757 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 NFIL3Q16649 462 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 UPP1Q16831 310 aa10.63□□□□□ -0.71
NIFK-205ENST00000477693 KNOP1Q1ED39 458 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms